RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 ADH1AP07327 375 aa16.98■□□□□ 0.31
TRIM50-203ENST00000488217 GLUD2P49448 558 aa16.98■□□□□ 0.31
TRIM50-203ENST00000488217 DSG1Q02413 1049 aa16.98■□□□□ 0.31
TRIM50-203ENST00000488217 SLC27A1Q6PCB7 646 aa16.98■□□□□ 0.31
TRIM50-203ENST00000488217 CDR2LQ86X02 465 aaPredicted RBP16.98■□□□□ 0.31
TRIM50-203ENST00000488217 RNF168Q8IYW5 571 aaPredicted RBP16.98■□□□□ 0.31
TRIM50-203ENST00000488217 CMASQ8NFW8 434 aaPredicted RBP16.98■□□□□ 0.31
TRIM50-203ENST00000488217 POLR3CQ9BUI4 534 aaPredicted RBP16.98■□□□□ 0.31
TRIM50-203ENST00000488217 SMOC2Q9H3U7 446 aa16.98■□□□□ 0.31
TRIM50-203ENST00000488217 GPRC5CQ9NQ84 441 aa16.98■□□□□ 0.31
TRIM50-203ENST00000488217 PARP2Q9UGN5 583 aa16.98■□□□□ 0.31
TRIM50-203ENST00000488217 LIMCH1Q9UPQ0 1083 aa16.98■□□□□ 0.31
TRIM50-203ENST00000488217 POTEMA6NI47 508 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 SEC24BO95487 1268 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 NPTXRO95502 500 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 C1RP00736 705 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 GUCY1B3Q02153 619 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 ZNF174Q15697 407 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 USP41Q3LFD5 358 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 ELMSAN1Q6PJG2 1045 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 CYP26C1Q6V0L0 522 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 CCDC149Q6ZUS6 474 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 MCPH1Q8NEM0 835 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 FZD8Q9H461 694 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 NXF3Q9H4D5 531 aaKnown RBP16.97■□□□□ 0.31
TRIM50-203ENST00000488217 PRMT7Q9NVM4 692 aaPredicted RBP16.97■□□□□ 0.31
TRIM50-203ENST00000488217 KLK14Q9P0G3 267 aa16.97■□□□□ 0.31
TRIM50-203ENST00000488217 LRRIQ4A6NIV6 560 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 F8W810 466 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 USO1O60763 962 aaKnown RBP16.96■□□□□ 0.31
TRIM50-203ENST00000488217 MED24O75448 989 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 TADA2AO75478 443 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 SPATA31D3P0C874 917 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 TDGQ13569 410 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 PADI6Q6TGC4 694 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 PPP4R3CPQ6ZMV5 832 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 SPATA31D4Q6ZUB0 917 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 PALB2Q86YC2 1186 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 GPR65Q8IYL9 337 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 HDAC7Q8WUI4 952 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 ATOH1Q92858 354 aaPredicted RBP16.96■□□□□ 0.31
TRIM50-203ENST00000488217 PRIMPOLQ96LW4 560 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 LLPHQ9BRT6 129 aaKnown RBP16.96■□□□□ 0.31
TRIM50-203ENST00000488217 GPR62Q9BZJ7 368 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 MAN1C1Q9NR34 630 aa16.96■□□□□ 0.31
TRIM50-203ENST00000488217 GLUD1P00367 558 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 MYBP10242 640 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 CYP11B2P19099 503 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 RPA1P27694 616 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 CLCN5P51795 746 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 ST3GAL1Q11201 340 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 FAM187BQ17R55 369 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 ZBTB8OSQ8IWT0 167 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 ERMNQ8TAM6 284 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 RABGGTAQ92696 567 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 C8orf76Q96K31 380 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 RHOBTB2Q9BYZ6 727 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 FOXP1Q9H334 677 aaPredicted RBP16.95■□□□□ 0.3
TRIM50-203ENST00000488217 PLEKHA4Q9H4M7 779 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 KCNK12Q9HB15 430 aa16.95■□□□□ 0.3
TRIM50-203ENST00000488217 WDR6Q9NNW5 1121 aaKnown RBP16.95■□□□□ 0.3
TRIM50-203ENST00000488217 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRIM50-203ENST00000488217 H0Y858 1186 aa16.94■□□□□ 0.3
TRIM50-203ENST00000488217 GALR2O43603 387 aaPredicted RBP16.94■□□□□ 0.3
TRIM50-203ENST00000488217 RBM25P49756 843 aaKnown RBP16.94■□□□□ 0.3
TRIM50-203ENST00000488217 GRIK3Q13003 919 aa16.94■□□□□ 0.3
TRIM50-203ENST00000488217 ORC2Q13416 577 aaPredicted RBP16.94■□□□□ 0.3
TRIM50-203ENST00000488217 CDCA2Q69YH5 1023 aaPredicted RBP16.94■□□□□ 0.3
TRIM50-203ENST00000488217 ASTLQ6HA08 431 aaPredicted RBP16.94■□□□□ 0.3
TRIM50-203ENST00000488217 FUT10Q6P4F1 479 aa16.94■□□□□ 0.3
TRIM50-203ENST00000488217 LILRA6Q6PI73 481 aa16.94■□□□□ 0.3
TRIM50-203ENST00000488217 TMEM105Q8N8V8 129 aa16.94■□□□□ 0.3
TRIM50-203ENST00000488217 FBXO18Q8NFZ0 1043 aa16.94■□□□□ 0.3
TRIM50-203ENST00000488217 B3GALT6Q96L58 329 aa16.94■□□□□ 0.3
TRIM50-203ENST00000488217 C2orf40Q9H1Z8 148 aa16.94■□□□□ 0.3
TRIM50-203ENST00000488217 MFSD1Q9H3U5 465 aa16.94■□□□□ 0.3
TRIM50-203ENST00000488217 FNIP2Q9P278 1114 aa16.94■□□□□ 0.3
TRIM50-203ENST00000488217 IGSF9Q9P2J2 1179 aa16.94■□□□□ 0.3
TRIM50-203ENST00000488217 ADAM28Q9UKQ2 775 aa16.94■□□□□ 0.3
TRIM50-203ENST00000488217 ACKR2O00590 384 aa16.93■□□□□ 0.3
TRIM50-203ENST00000488217 TGM5O43548 720 aa16.93■□□□□ 0.3
TRIM50-203ENST00000488217 RFPL2O75678 378 aa16.93■□□□□ 0.3
TRIM50-203ENST00000488217 OR52Z1P0C646 297 aa16.93■□□□□ 0.3
TRIM50-203ENST00000488217 PRPF4BQ13523 1007 aaKnown RBP16.93■□□□□ 0.3
TRIM50-203ENST00000488217 MAPK6Q16659 721 aa16.93■□□□□ 0.3
TRIM50-203ENST00000488217 CCDC83Q8IWF9 413 aa16.93■□□□□ 0.3
TRIM50-203ENST00000488217 RIN2Q8WYP3 895 aaPredicted RBP16.93■□□□□ 0.3
TRIM50-203ENST00000488217 STAMQ92783 540 aa16.93■□□□□ 0.3
TRIM50-203ENST00000488217 NT5C3AQ9H0P0 336 aa16.93■□□□□ 0.3
TRIM50-203ENST00000488217 SNTG2Q9NY99 539 aa16.93■□□□□ 0.3
TRIM50-203ENST00000488217 WDR81Q562E7 1941 aa16.93■□□□□ 0.3
TRIM50-203ENST00000488217 ARHGEF35A5YM69 484 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 TTLL13PA6NNM8 815 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 N4BP3O15049 544 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 PAPLNO95428 1278 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 MUTP22033 750 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 TUSC3Q13454 348 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 PDIA5Q14554 519 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 HSP90AA2PQ14568 343 aaPredicted RBP16.92■□□□□ 0.3
TRIM50-203ENST00000488217 TMEM132AQ24JP5 1023 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms