RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SPOUT1Q5T280 376 aaKnown RBP17.22■□□□□ 0.35
C9orf3-219ENST00000488186 ZNF697Q5TEC3 545 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 MRPL10Q7Z7H8 261 aaKnown RBP17.22■□□□□ 0.35
C9orf3-219ENST00000488186 FIBCD1Q8N539 461 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 URGCPQ8TCY9 931 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 ZBTB45Q96K62 511 aaPredicted RBP17.22■□□□□ 0.35
C9orf3-219ENST00000488186 GSDMAQ96QA5 445 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 NKX2-4Q9H2Z4 354 aa17.22■□□□□ 0.35
C9orf3-219ENST00000488186 TULP1O00294 542 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-219ENST00000488186 RHOBTB3O94955 611 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 AKAP5P24588 427 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 YARSP54577 528 aaKnown RBP17.21■□□□□ 0.35
C9orf3-219ENST00000488186 KCNB1Q14721 858 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 NOLC1Q14978 699 aaKnown RBP eCLIP17.21■□□□□ 0.35
C9orf3-219ENST00000488186 CAMK4Q16566 473 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 ZNF598Q86UK7 904 aaKnown RBP17.21■□□□□ 0.35
C9orf3-219ENST00000488186 NELFCDQ8IXH7 590 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 THNSL1Q8IYQ7 743 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 SMG8Q8ND04 991 aaKnown RBP17.21■□□□□ 0.35
C9orf3-219ENST00000488186 SP7Q8TDD2 431 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-219ENST00000488186 HELQQ8TDG4 1101 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 MSTO1Q9BUK6 570 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 CCDC94Q9BW85 323 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-219ENST00000488186 STRA6Q9BX79 667 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 GTPBP4Q9BZE4 634 aaKnown RBP17.21■□□□□ 0.35
C9orf3-219ENST00000488186 TMEM117Q9H0C3 514 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 SEMA6BQ9H3T3 888 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 NXF3Q9H4D5 531 aaKnown RBP17.21■□□□□ 0.35
C9orf3-219ENST00000488186 RSAD1Q9HA92 442 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 SNTG2Q9NY99 539 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 INPP5FQ9Y2H2 1132 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 GDAQ9Y2T3 454 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 HES2Q9Y543 173 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 PCDHA5Q9Y5H7 936 aa17.21■□□□□ 0.35
C9orf3-219ENST00000488186 PPP1R37O75864 691 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 PIGRP01833 764 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 CA3P07451 260 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 GATMP50440 423 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 OSTNP61366 133 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 RNASELQ05823 741 aaKnown RBP17.2■□□□□ 0.34
C9orf3-219ENST00000488186 EHHADHQ08426 723 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 KCNA1Q09470 495 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 STK4Q13043 487 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 KYAT1Q16773 422 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 PPP2R2DQ66LE6 453 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 CMTR2Q8IYT2 770 aaKnown RBP17.2■□□□□ 0.34
C9orf3-219ENST00000488186 ZNF507Q8TCN5 953 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 RSPH1Q8WYR4 309 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 POMGNT1Q8WZA1 660 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 ERCC4Q92889 916 aaPredicted RBP17.2■□□□□ 0.34
C9orf3-219ENST00000488186 FAM193BQ96PV7 902 aaPredicted RBP17.2■□□□□ 0.34
C9orf3-219ENST00000488186 RPS6KC1Q96S38 1066 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 MRPL9Q9BYD2 267 aaKnown RBP17.2■□□□□ 0.34
C9orf3-219ENST00000488186 FGFBP2Q9BYJ0 223 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 CDT1Q9H211 546 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 ZNF576Q9H609 170 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 PTPRHQ9HD43 1115 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 MTMR10Q9NXD2 777 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 KANSL3Q9P2N6 904 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 YBX2Q9Y2T7 364 aaKnown RBP17.2■□□□□ 0.34
C9orf3-219ENST00000488186 GIT1Q9Y2X7 761 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 UBE4BO95155 1302 aa17.2■□□□□ 0.34
C9orf3-219ENST00000488186 MBD3O95983 291 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 ATF7P17544 494 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-219ENST00000488186 PROZP22891 400 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 MCM4P33991 863 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 MCL1Q07820 350 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 NOMO2Q5JPE7 1267 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 AGMOQ6ZNB7 445 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 EPM2AIP1Q7L775 607 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-219ENST00000488186 HS2ST1Q7LGA3 356 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 DEFB123Q8N688 67 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 GLIS3Q8NEA6 775 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 NOC3LQ8WTT2 800 aaKnown RBP17.19■□□□□ 0.34
C9orf3-219ENST00000488186 ZNF689Q96CS4 500 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-219ENST00000488186 ACAP3Q96P50 834 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 CASD1Q96PB1 797 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 GBP3Q9H0R5 595 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 TTYH1Q9H313 450 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-219ENST00000488186 TOPORSQ9NS56 1045 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-219ENST00000488186 CDH23Q9H251 3354 aa17.19■□□□□ 0.34
C9orf3-219ENST00000488186 CHD7Q9P2D1 2997 aa17.18■□□□□ 0.34
C9orf3-219ENST00000488186 LCHNA4D1U4 455 aa17.18■□□□□ 0.34
C9orf3-219ENST00000488186 ANKRD63C9JTQ0 380 aa17.18■□□□□ 0.34
C9orf3-219ENST00000488186 OFD1O75665 1012 aa17.18■□□□□ 0.34
C9orf3-219ENST00000488186 PTMSP20962 102 aa17.18■□□□□ 0.34
C9orf3-219ENST00000488186 GRM5P41594 1212 aa17.18■□□□□ 0.34
C9orf3-219ENST00000488186 KNOP1Q1ED39 458 aaKnown RBP17.18■□□□□ 0.34
C9orf3-219ENST00000488186 CLLU1OSQ5K130 101 aa17.18■□□□□ 0.34
C9orf3-219ENST00000488186 ARMCX5Q6P1M9 558 aa17.18■□□□□ 0.34
C9orf3-219ENST00000488186 SCFD1Q8WVM8 642 aa17.18■□□□□ 0.34
C9orf3-219ENST00000488186 NUP62CLQ9H1M0 184 aa17.18■□□□□ 0.34
C9orf3-219ENST00000488186 RC3H2Q9HBD1 1191 aaKnown RBP17.18■□□□□ 0.34
C9orf3-219ENST00000488186 AAASQ9NRG9 546 aa17.18■□□□□ 0.34
C9orf3-219ENST00000488186 KLK14Q9P0G3 267 aa17.18■□□□□ 0.34
C9orf3-219ENST00000488186 AGO2Q9UKV8 859 aaKnown RBP17.18■□□□□ 0.34
C9orf3-219ENST00000488186 A0A0B4J269 797 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 ARL5CA6NH57 179 aa17.17■□□□□ 0.34
C9orf3-219ENST00000488186 MEIS3P2A8K0S8 358 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms