RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 NHEJ1Q9H9Q4 299 aaPredicted RBP14.84□□□□□ -0.03
COPS7B-221ENST00000488111 PARVGQ9HBI0 331 aa14.84□□□□□ -0.03
COPS7B-221ENST00000488111 NRBP2Q9NSY0 501 aa14.84□□□□□ -0.03
COPS7B-221ENST00000488111 KCND2Q9NZV8 630 aa14.84□□□□□ -0.03
COPS7B-221ENST00000488111 BCCIPQ9P287 314 aaKnown RBP eCLIP14.84□□□□□ -0.03
COPS7B-221ENST00000488111 DUSP10Q9Y6W6 482 aa14.84□□□□□ -0.03
COPS7B-221ENST00000488111 NMT1P30419 496 aaKnown RBP14.83□□□□□ -0.03
COPS7B-221ENST00000488111 SLC7A5Q01650 507 aa14.83□□□□□ -0.03
COPS7B-221ENST00000488111 GUCY1A3Q02108 690 aa14.83□□□□□ -0.03
COPS7B-221ENST00000488111 RNF187Q5TA31 235 aaPredicted RBP14.83□□□□□ -0.03
COPS7B-221ENST00000488111 TLK2Q86UE8 772 aa14.83□□□□□ -0.03
COPS7B-221ENST00000488111 RNPEPQ9H4A4 650 aa14.83□□□□□ -0.03
COPS7B-221ENST00000488111 SMARCAD1Q9H4L7 1026 aa14.83□□□□□ -0.03
COPS7B-221ENST00000488111 HTTP42858 3142 aa14.83□□□□□ -0.04
COPS7B-221ENST00000488111 MACROD2A1Z1Q3 448 aa14.83□□□□□ -0.04
COPS7B-221ENST00000488111 ZNF233A6NK53 670 aa14.83□□□□□ -0.04
COPS7B-221ENST00000488111 NKRFO15226 690 aaKnown RBP eCLIP14.83□□□□□ -0.04
COPS7B-221ENST00000488111 FKTNO75072 461 aa14.83□□□□□ -0.04
COPS7B-221ENST00000488111 IPO7O95373 1038 aaKnown RBP14.83□□□□□ -0.04
COPS7B-221ENST00000488111 MYBP10242 640 aa14.83□□□□□ -0.04
COPS7B-221ENST00000488111 NR1D1P20393 614 aa14.83□□□□□ -0.04
COPS7B-221ENST00000488111 EEF1GP26641 437 aaKnown RBP14.83□□□□□ -0.04
COPS7B-221ENST00000488111 KIF5AQ12840 1032 aa14.83□□□□□ -0.04
COPS7B-221ENST00000488111 KCTD16Q68DU8 428 aa14.83□□□□□ -0.04
COPS7B-221ENST00000488111 PLPPR4Q7Z2D5 763 aa14.83□□□□□ -0.04
COPS7B-221ENST00000488111 NELFCDQ8IXH7 590 aa14.83□□□□□ -0.04
COPS7B-221ENST00000488111 EEF2KMTQ96G04 330 aa14.83□□□□□ -0.04
COPS7B-221ENST00000488111 FAXDC2Q96IV6 333 aa14.83□□□□□ -0.04
COPS7B-221ENST00000488111 PSMA7O14818 248 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 FAM107AO95990 144 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 KRT14P02533 472 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 MMP3P08254 477 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 HOXD10P28358 340 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 MDH1P40925 334 aaKnown RBP14.82□□□□□ -0.04
COPS7B-221ENST00000488111 C1QTNF8P60827 252 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 CDK17Q00537 523 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 CACNB2Q08289 660 aaPredicted RBP14.82□□□□□ -0.04
COPS7B-221ENST00000488111 GLE1Q53GS7 698 aaKnown RBP14.82□□□□□ -0.04
COPS7B-221ENST00000488111 ODR4Q5SWX8 454 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 KSR1Q8IVT5 923 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 MREGQ8N565 214 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 PPP1R13LQ8WUF5 828 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 TRAPPC12Q8WVT3 735 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 NIFKQ9BYG3 293 aaKnown RBP14.82□□□□□ -0.04
COPS7B-221ENST00000488111 TRPC6Q9Y210 931 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 EMSYQ7Z589 1322 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 PPP1R12AO14974 1030 aaPredicted RBP14.82□□□□□ -0.04
COPS7B-221ENST00000488111 TACC1O75410 805 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 GCNT3O95395 438 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 CYBAP13498 195 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 TCP1P17987 556 aaKnown RBP14.82□□□□□ -0.04
COPS7B-221ENST00000488111 POLGP54098 1239 aaPredicted RBP14.82□□□□□ -0.04
COPS7B-221ENST00000488111 BEX3Q00994 111 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 CRYMQ14894 314 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 SNCBQ16143 134 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 CFAP58Q5T655 872 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 CCDC50Q8IVM0 306 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 MYOCDQ8IZQ8 938 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 CEP120Q8N960 986 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 RAET1EQ8TD07 263 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 SCFD1Q8WVM8 642 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 ZBTB10Q96DT7 871 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 OSBPL9Q96SU4 736 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 C16orf70Q9BSU1 422 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 SEMA6BQ9H3T3 888 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 XPNPEP1Q9NQW7 623 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 ZNHIT6Q9NWK9 470 aaKnown RBP14.82□□□□□ -0.04
COPS7B-221ENST00000488111 HYOU1Q9Y4L1 999 aa14.82□□□□□ -0.04
COPS7B-221ENST00000488111 ADCY3O60266 1144 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 DGAT1O75907 488 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 AKR1A1P14550 325 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 GAP43P17677 238 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 ZNF131P52739 623 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 KCNA1Q09470 495 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 IFT88Q13099 833 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 ZC2HC1CQ53FD0 456 aaPredicted RBP14.81□□□□□ -0.04
COPS7B-221ENST00000488111 ANKRD40Q6AI12 368 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 FAM178BQ8IXR5 827 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 RETREG2Q8NC44 543 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 ATP8B4Q8TF62 1192 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 PIK3R5Q8WYR1 880 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 TMEM143Q96AN5 459 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 BEGAINQ9BUH8 593 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 NUP58Q9BVL2 599 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 THAP9Q9H5L6 903 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 GDF3Q9NR23 364 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 SAGE1Q9NXZ1 904 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 ERAP1Q9NZ08 941 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 PRKAR2AP13861 404 aaKnown RBP14.81□□□□□ -0.04
COPS7B-221ENST00000488111 CCND3P30281 292 aaPredicted RBP14.81□□□□□ -0.04
COPS7B-221ENST00000488111 DNM2P50570 870 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 CDR1P51861 262 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 PEX3P56589 373 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 IGBP1P78318 339 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 ZBED6P86452 979 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 EMC2Q15006 297 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 TARBP2Q15633 366 aaKnown RBP14.81□□□□□ -0.04
COPS7B-221ENST00000488111 DGKDQ16760 1214 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 FAM228AQ86W67 206 aa14.81□□□□□ -0.04
COPS7B-221ENST00000488111 PARP9Q8IXQ6 854 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms