RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CCDC169A6NNP5 214 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 K7ELQ4 463 aaPredicted RBP12.62□□□□□ -0.39
SPEN-205ENST00000487496 K7ERI5 159 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 CLASP2O75122 1294 aaKnown RBP12.62□□□□□ -0.39
SPEN-205ENST00000487496 SSBP05455 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
SPEN-205ENST00000487496 SRGAP2BP0DMP2 458 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 SYT1P21579 422 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 GUCY2CP25092 1073 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 CA8P35219 290 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 OR1G1P47890 313 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 SLC12A3P55017 1021 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 MAPK7Q13164 816 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 DMP1Q13316 513 aaPredicted RBP12.62□□□□□ -0.39
SPEN-205ENST00000487496 GIT2Q14161 759 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 TMEM132AQ24JP5 1023 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 TMEM119Q4V9L6 283 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 NT5DC1Q5TFE4 455 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 EEF1DP3Q658K8 133 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 CABP7Q86V35 215 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 SYT2Q8N9I0 419 aaPredicted RBP12.62□□□□□ -0.39
SPEN-205ENST00000487496 CDK5RAP3Q96JB5 506 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 DRC1Q96MC2 740 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 EPHX3Q9H6B9 360 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 MARCH5Q9NX47 278 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 STK39Q9UEW8 545 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 PRG3Q9Y2Y8 225 aaPredicted RBP12.62□□□□□ -0.39
SPEN-205ENST00000487496 USP15Q9Y4E8 981 aaPredicted RBP12.62□□□□□ -0.39
SPEN-205ENST00000487496 HCFC2Q9Y5Z7 792 aa12.62□□□□□ -0.39
SPEN-205ENST00000487496 ZMYM2Q9UBW7 1377 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 SFI1A8K8P3 1242 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 SLC26A4O43511 780 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 NR1I2O75469 434 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 PLA2G4BP0C869 781 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 PRKCSHP14314 528 aaPredicted RBP12.61□□□□□ -0.39
SPEN-205ENST00000487496 UBA7P41226 1012 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 GRIN1Q05586 938 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 RAD51AP2Q09MP3 1159 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 GRIK3Q13003 919 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 PTPN14Q15678 1187 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 ATF7IP2Q5U623 682 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 ANKRD54Q6NXT1 300 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 SYCE2Q6PIF2 218 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 ADPGKQ9BRR6 497 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 TIPINQ9BVW5 301 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 S1PR5Q9H228 398 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 C17orf75Q9HAS0 396 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 KMT5AQ9NQR1 393 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 SNTG2Q9NY99 539 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 ARHGAP28Q9P2N2 729 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 RBM19Q9Y4C8 960 aaKnown RBP12.61□□□□□ -0.39
SPEN-205ENST00000487496 GTF3C3Q9Y5Q9 886 aa12.61□□□□□ -0.39
SPEN-205ENST00000487496 F8W810 466 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 LILRB3O75022 631 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 RECQL4O94761 1208 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 EFEMP2O95967 443 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 SOD2P04179 222 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 HOXB8P17481 243 aaPredicted RBP12.6□□□□□ -0.39
SPEN-205ENST00000487496 LONP1P36776 959 aaKnown RBP12.6□□□□□ -0.39
SPEN-205ENST00000487496 PLCB2Q00722 1185 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 RESTQ13127 1097 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 PTPAQ15257 358 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 DCAF4L1Q3SXM0 396 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 FAM173BQ6P4H8 233 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 TAS1R3Q7RTX0 852 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 TAS1R1Q7RTX1 841 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 TMEM87AQ8NBN3 555 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 LRRC15Q8TF66 581 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 SUSD6Q92537 303 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 CASP10Q92851 521 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 SNX21Q969T3 373 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 CALML4Q96GE6 196 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 RPS6KC1Q96S38 1066 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 POP1Q99575 1024 aaKnown RBP12.6□□□□□ -0.39
SPEN-205ENST00000487496 NTPCRQ9BSD7 190 aaKnown RBP12.6□□□□□ -0.39
SPEN-205ENST00000487496 COLEC11Q9BWP8 271 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 C1QTNF1Q9BXJ1 281 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 TMEM134Q9H6X4 195 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 KCND2Q9NZV8 630 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 DAXXQ9UER7 740 aaPredicted RBP12.6□□□□□ -0.39
SPEN-205ENST00000487496 KCNG1Q9UIX4 513 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 MTMR6Q9Y217 621 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 TNFSF13BQ9Y275 285 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 CLIC4Q9Y696 253 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 PHLPP2Q6ZVD8 1323 aa12.6□□□□□ -0.39
SPEN-205ENST00000487496 PI4K2BG5E9Z4 385 aa12.59□□□□□ -0.39
SPEN-205ENST00000487496 PTGESO14684 152 aa12.59□□□□□ -0.39
SPEN-205ENST00000487496 SLC16A4O15374 487 aa12.59□□□□□ -0.39
SPEN-205ENST00000487496 PLS3P13797 630 aa12.59□□□□□ -0.39
SPEN-205ENST00000487496 ARSHQ5FYA8 562 aa12.59□□□□□ -0.39
SPEN-205ENST00000487496 RNF168Q8IYW5 571 aaPredicted RBP12.59□□□□□ -0.39
SPEN-205ENST00000487496 SLC22A17Q8WUG5 538 aa12.59□□□□□ -0.39
SPEN-205ENST00000487496 SPIRE2Q8WWL2 714 aa12.59□□□□□ -0.39
SPEN-205ENST00000487496 KLHL5Q96PQ7 755 aa12.59□□□□□ -0.39
SPEN-205ENST00000487496 ACO2Q99798 780 aaKnown RBP12.59□□□□□ -0.39
SPEN-205ENST00000487496 TARS2Q9BW92 718 aaKnown RBP12.59□□□□□ -0.39
SPEN-205ENST00000487496 APOL5Q9BWW9 433 aa12.59□□□□□ -0.39
SPEN-205ENST00000487496 MRPL4Q9BYD3 311 aaKnown RBP12.59□□□□□ -0.39
SPEN-205ENST00000487496 CXCL16Q9H2A7 254 aa12.59□□□□□ -0.39
SPEN-205ENST00000487496 PTPRHQ9HD43 1115 aa12.59□□□□□ -0.39
SPEN-205ENST00000487496 MRPL17Q9NRX2 175 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms