RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 NOL7Q9UMY1 257 aaKnown RBP27.17■■□□□ 1.94
LIME1-206ENST00000487026 LIG1P18858 919 aa27.16■■□□□ 1.94
LIME1-206ENST00000487026 CYP11B2P19099 503 aa27.16■■□□□ 1.94
LIME1-206ENST00000487026 CCT6AP40227 531 aaKnown RBP27.16■■□□□ 1.94
LIME1-206ENST00000487026 TOB1P50616 345 aaPredicted RBP27.16■■□□□ 1.94
LIME1-206ENST00000487026 PPP4R3CPQ6ZMV5 832 aa27.16■■□□□ 1.94
LIME1-206ENST00000487026 BMP8AQ7Z5Y6 402 aa27.16■■□□□ 1.94
LIME1-206ENST00000487026 ZBTB8OSQ8IWT0 167 aa27.16■■□□□ 1.94
LIME1-206ENST00000487026 HERC2P3Q9BVR0 1158 aa27.16■■□□□ 1.94
LIME1-206ENST00000487026 LRWD1Q9UFC0 647 aa27.16■■□□□ 1.94
LIME1-206ENST00000487026 WDFY4Q6ZS81 3184 aa27.15■■□□□ 1.94
LIME1-206ENST00000487026 SPDYE4A6NLX3 237 aa27.15■■□□□ 1.94
LIME1-206ENST00000487026 URODP06132 367 aa27.15■■□□□ 1.94
LIME1-206ENST00000487026 MYBP10242 640 aa27.15■■□□□ 1.94
LIME1-206ENST00000487026 U2AF2P26368 475 aaKnown RBP eCLIP27.15■■□□□ 1.941e-9■■■■□ 23
LIME1-206ENST00000487026 TRAPPC10P48553 1259 aa27.15■■□□□ 1.94
LIME1-206ENST00000487026 FXR2P51116 673 aaKnown RBP eCLIP27.15■■□□□ 1.94
LIME1-206ENST00000487026 SIGLEC14Q08ET2 396 aa27.15■■□□□ 1.94
LIME1-206ENST00000487026 KIAA1841Q6NSI8 718 aa27.15■■□□□ 1.94
LIME1-206ENST00000487026 B3GALT6Q96L58 329 aa27.15■■□□□ 1.94
LIME1-206ENST00000487026 PCDHB6Q9Y5E3 794 aa27.15■■□□□ 1.94
LIME1-206ENST00000487026 NR1I2O75469 434 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 EFEMP2O95967 443 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 HOXD11P31277 338 aaPredicted RBP27.14■■□□□ 1.94
LIME1-206ENST00000487026 PTGDRQ13258 359 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 TMEM132AQ24JP5 1023 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 KIAA0319Q5VV43 1072 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 KREMEN2Q8NCW0 462 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 PRIMPOLQ96LW4 560 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 RPS6KC1Q96S38 1066 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 COLEC11Q9BWP8 271 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 BHMT2Q9H2M3 363 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 PDZD7Q9H5P4 517 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 CACNG4Q9UBN1 327 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 KIAA1024Q9UPX6 916 aa27.14■■□□□ 1.94
LIME1-206ENST00000487026 ZNF318Q5VUA4 2279 aa27.13■■□□□ 1.93
LIME1-206ENST00000487026 EDN1P05305 212 aa27.13■■□□□ 1.93
LIME1-206ENST00000487026 GLUD2P49448 558 aa27.13■■□□□ 1.93
LIME1-206ENST00000487026 PRPF4BQ13523 1007 aaKnown RBP27.13■■□□□ 1.93
LIME1-206ENST00000487026 FAM187BQ17R55 369 aa27.13■■□□□ 1.93
LIME1-206ENST00000487026 HAUS3Q68CZ6 603 aa27.13■■□□□ 1.93
LIME1-206ENST00000487026 RNF168Q8IYW5 571 aaPredicted RBP27.13■■□□□ 1.93
LIME1-206ENST00000487026 ASIC4Q96FT7 647 aa27.13■■□□□ 1.93
LIME1-206ENST00000487026 KIFC3Q9BVG8 833 aa27.13■■□□□ 1.93
LIME1-206ENST00000487026 C2orf40Q9H1Z8 148 aa27.13■■□□□ 1.93
LIME1-206ENST00000487026 SFXN1Q9H9B4 322 aa27.13■■□□□ 1.93
LIME1-206ENST00000487026 SNTG2Q9NY99 539 aa27.13■■□□□ 1.93
LIME1-206ENST00000487026 TDRD15B5MCY1 1934 aaKnown RBP27.13■■□□□ 1.93
LIME1-206ENST00000487026 TEX28O15482 410 aa27.12■■□□□ 1.93
LIME1-206ENST00000487026 PRKCBP05771 671 aa27.12■■□□□ 1.93
LIME1-206ENST00000487026 IER5LQ5T953 404 aa27.12■■□□□ 1.93
LIME1-206ENST00000487026 GPR149Q86SP6 731 aa27.12■■□□□ 1.93
LIME1-206ENST00000487026 DEPTORQ8TB45 409 aa27.12■■□□□ 1.93
LIME1-206ENST00000487026 GPR62Q9BZJ7 368 aa27.12■■□□□ 1.93
LIME1-206ENST00000487026 CXCL16Q9H2A7 254 aa27.12■■□□□ 1.93
LIME1-206ENST00000487026 DDX19AQ9NUU7 478 aaKnown RBP27.12■■□□□ 1.93
LIME1-206ENST00000487026 LIMD1Q9UGP4 676 aa27.12■■□□□ 1.93
LIME1-206ENST00000487026 ASGR2P07307 311 aa27.11■■□□□ 1.93
LIME1-206ENST00000487026 MUTP22033 750 aa27.11■■□□□ 1.93
LIME1-206ENST00000487026 NAMPTP43490 491 aa27.11■■□□□ 1.93
LIME1-206ENST00000487026 GRIK3Q13003 919 aa27.11■■□□□ 1.93
LIME1-206ENST00000487026 PDIA5Q14554 519 aa27.11■■□□□ 1.93
LIME1-206ENST00000487026 MAPK6Q16659 721 aa27.11■■□□□ 1.93
LIME1-206ENST00000487026 PAAF1Q9BRP4 392 aa27.11■■□□□ 1.93
LIME1-206ENST00000487026 CCDC113Q9H0I3 377 aa27.11■■□□□ 1.93
LIME1-206ENST00000487026 SMOC2Q9H3U7 446 aa27.11■■□□□ 1.93
LIME1-206ENST00000487026 MAN1C1Q9NR34 630 aa27.11■■□□□ 1.93
LIME1-206ENST00000487026 SSX2IPQ9Y2D8 614 aa27.11■■□□□ 1.93
LIME1-206ENST00000487026 MYO10Q9HD67 2058 aa27.11■■□□□ 1.93
LIME1-206ENST00000487026 PP2D1A8MPX8 630 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 ACKR2O00590 384 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 N4BP3O15049 544 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 SPATA31D3P0C874 917 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 DSG1Q02413 1049 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 IL17AQ16552 155 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 EEF1DP3Q658K8 133 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 FUT10Q6P4F1 479 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 SPATA31D4Q6ZUB0 917 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 SUGP1Q8IWZ8 645 aaKnown RBP27.1■■□□□ 1.93
LIME1-206ENST00000487026 FBXL6Q8N531 539 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 IGSF22Q8N9C0 903 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 TDRD5Q8NAT2 981 aaKnown RBP27.1■■□□□ 1.93
LIME1-206ENST00000487026 SNX29Q8TEQ0 813 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 RXFP1Q9HBX9 757 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 CHST7Q9NS84 486 aa27.1■■□□□ 1.93
LIME1-206ENST00000487026 BRD1O95696 1058 aa27.09■■□□□ 1.93
LIME1-206ENST00000487026 ADH1AP07327 375 aa27.09■■□□□ 1.93
LIME1-206ENST00000487026 CDC25AP30304 524 aa27.09■■□□□ 1.93
LIME1-206ENST00000487026 NHLH1Q02575 133 aa27.09■■□□□ 1.93
LIME1-206ENST00000487026 RABEP1Q15276 862 aa27.09■■□□□ 1.93
LIME1-206ENST00000487026 PALB2Q86YC2 1186 aa27.09■■□□□ 1.93
LIME1-206ENST00000487026 IFT74Q96LB3 600 aa27.09■■□□□ 1.93
LIME1-206ENST00000487026 KCNH6Q9H252 994 aa27.09■■□□□ 1.93
LIME1-206ENST00000487026 ADAM28Q9UKQ2 775 aa27.09■■□□□ 1.93
LIME1-206ENST00000487026 SORCS3Q9UPU3 1222 aa27.09■■□□□ 1.93
LIME1-206ENST00000487026 CASTOR2A6NHX0 329 aa27.08■■□□□ 1.93
LIME1-206ENST00000487026 E9PMD0 336 aa27.08■■□□□ 1.93
LIME1-206ENST00000487026 PTGESO14684 152 aa27.08■■□□□ 1.93
LIME1-206ENST00000487026 TADA2AO75478 443 aa27.08■■□□□ 1.93
LIME1-206ENST00000487026 PDGFBP01127 241 aaPredicted RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms