RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 GPR135Q8IZ08 494 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 TDRD7Q8NHU6 1098 aaKnown RBP6.29□□□□□ -1.4
COPS3-209ENST00000486810 SMCR8Q8TEV9 937 aaPredicted RBP6.29□□□□□ -1.4
COPS3-209ENST00000486810 SAMD11Q96NU1 681 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 CEP89Q96ST8 783 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 FDXACB1Q9BRP7 624 aaPredicted RBP6.29□□□□□ -1.4
COPS3-209ENST00000486810 UPF2Q9HAU5 1272 aaKnown RBP6.29□□□□□ -1.4
COPS3-209ENST00000486810 VEZTQ9HBM0 779 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 FAM184BQ9ULE4 1060 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 NOC2LQ9Y3T9 749 aaKnown RBP6.29□□□□□ -1.4
COPS3-209ENST00000486810 JRKLQ9Y4A0 524 aa6.29□□□□□ -1.4
COPS3-209ENST00000486810 SMARCA2P51531 1590 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 GPR39O43194 453 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 KINO60870 393 aaKnown RBP6.28□□□□□ -1.4
COPS3-209ENST00000486810 ULK1O75385 1050 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 MAP4K4O95819 1239 aaPredicted RBP6.28□□□□□ -1.4
COPS3-209ENST00000486810 MSNP26038 577 aaKnown RBP6.28□□□□□ -1.4
COPS3-209ENST00000486810 ADCY7P51828 1080 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 RWDD2BP57060 319 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 SESN3P58005 492 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 TMPRSS15P98073 1019 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 CCDC173Q0VFZ6 552 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 BECN1Q14457 450 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 ZNF568Q3ZCX4 644 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 C4orf46Q504U0 113 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 CT83Q5H943 113 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 PITRM1Q5JRX3 1037 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 CCDC73Q6ZRK6 1079 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 FMNL3Q8IVF7 1028 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 FUKQ8N0W3 1084 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 MIGA1Q8NAN2 632 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 Q8TCH9 128 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 C17orf50Q8WW18 174 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 FERMT2Q96AC1 680 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 LOXL4Q96JB6 756 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 WDR92Q96MX6 357 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 PLA2G12BQ9BX93 195 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 SPC25Q9HBM1 224 aa6.28□□□□□ -1.4
COPS3-209ENST00000486810 PUF60Q9UHX1 559 aaKnown RBP6.28□□□□□ -1.4
COPS3-209ENST00000486810 CDC14BO60729 498 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 DNAJC6O75061 913 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 PRKD3O94806 890 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 SEC24DO94855 1032 aaPredicted RBP6.27□□□□□ -1.41
COPS3-209ENST00000486810 MAGEA10P43363 369 aaPredicted RBP6.27□□□□□ -1.41
COPS3-209ENST00000486810 TMED1Q13445 227 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 PDIA5Q14554 519 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 PDCD2Q16342 344 aaPredicted RBP6.27□□□□□ -1.41
COPS3-209ENST00000486810 MUM1L1Q5H9M0 696 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 MFSD4BQ5TF39 518 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 CCDC30Q5VVM6 783 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 GAREM2Q75VX8 874 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 TRIM74Q86UV6 250 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 TRIM73Q86UV7 250 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 DDX42Q86XP3 938 aaKnown RBP eCLIP6.27□□□□□ -1.41
COPS3-209ENST00000486810 PIK3C3Q8NEB9 887 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 COG1Q8WTW3 980 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 GFM2Q969S9 779 aaKnown RBP6.27□□□□□ -1.41
COPS3-209ENST00000486810 TEKT1Q969V4 418 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 SYAP1Q96A49 352 aaPredicted RBP6.27□□□□□ -1.41
COPS3-209ENST00000486810 SLC7A6OSQ96CW6 309 aaPredicted RBP6.27□□□□□ -1.41
COPS3-209ENST00000486810 C8orf49Q96NF6 230 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 GPHA2Q96T91 129 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 TRPV5Q9NQA5 729 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 GNL3LQ9NVN8 582 aaKnown RBP6.27□□□□□ -1.41
COPS3-209ENST00000486810 SMPD4Q9NXE4 827 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 POGKQ9P215 609 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 SWAP70Q9UH65 585 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 USP18Q9UMW8 372 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 ZFR2Q9UPR6 939 aaKnown RBP6.27□□□□□ -1.41
COPS3-209ENST00000486810 JAG2Q9Y219 1238 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 PCDHB6Q9Y5E3 794 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.27□□□□□ -1.41
COPS3-209ENST00000486810 RBM8AQ9Y5S9 174 aaKnown RBP6.27□□□□□ -1.41
COPS3-209ENST00000486810 NUMBLQ9Y6R0 609 aa6.27□□□□□ -1.41
COPS3-209ENST00000486810 TMCO5BA8MYB1 307 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 HTATSF1O43719 755 aaKnown RBP6.26□□□□□ -1.41
COPS3-209ENST00000486810 CAND2O75155 1236 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 H2AFYO75367 372 aaKnown RBP6.26□□□□□ -1.41
COPS3-209ENST00000486810 CDKL5O76039 1030 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 TPPPO94811 219 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 REC8O95072 547 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 LPLP06858 475 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 GAAP10253 952 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 SESN2P58004 480 aaPredicted RBP6.26□□□□□ -1.41
COPS3-209ENST00000486810 ADAM17P78536 824 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 AMPD3Q01432 767 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 CD69Q07108 199 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 PPP2R5AQ15172 486 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 CCDC62Q6P9F0 684 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 PRRT2Q7Z6L0 340 aaPredicted RBP6.26□□□□□ -1.41
COPS3-209ENST00000486810 EFCAB13Q8IY85 973 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 TTC9BQ8N6N2 239 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 CDYL2Q8N8U2 506 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 PLA2G15Q8NCC3 412 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 WDR66Q8TBY9 1149 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 LMBR1Q8WVP7 490 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 RMDN2Q96LZ7 410 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 OSBPL6Q9BZF3 934 aa6.26□□□□□ -1.41
COPS3-209ENST00000486810 RSPH9Q9H1X1 276 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms