RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TAF1BQ53T94 588 aaPredicted RBP11.39□□□□□ -0.59
CCDC171-208ENST00000486641 TMEM63BQ5T3F8 832 aa11.39□□□□□ -0.59
CCDC171-208ENST00000486641 RHBDF2Q6PJF5 856 aa11.39□□□□□ -0.59
CCDC171-208ENST00000486641 DSTYKQ6XUX3 929 aa11.39□□□□□ -0.59
CCDC171-208ENST00000486641 ZNF444Q8N0Y2 327 aaPredicted RBP11.39□□□□□ -0.59
CCDC171-208ENST00000486641 MIPEPQ99797 713 aa11.39□□□□□ -0.59
CCDC171-208ENST00000486641 TIPINQ9BVW5 301 aa11.39□□□□□ -0.59
CCDC171-208ENST00000486641 DMAP1Q9NPF5 467 aaPredicted RBP11.39□□□□□ -0.59
CCDC171-208ENST00000486641 DNAJC12Q9UKB3 198 aa11.39□□□□□ -0.59
CCDC171-208ENST00000486641 RPL26L1Q9UNX3 145 aaKnown RBP11.39□□□□□ -0.59
CCDC171-208ENST00000486641 ZNF142P52746 1687 aaPredicted RBP11.39□□□□□ -0.59
CCDC171-208ENST00000486641 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 POTEFA5A3E0 1075 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 MAGEA13PA6NCF6 341 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 FAM196BA6NMK8 535 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 MIF4GDA9UHW6 222 aaKnown RBP11.38□□□□□ -0.59
CCDC171-208ENST00000486641 POTECB2RU33 542 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 GGPS1O95749 300 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 POTEIP0CG38 1075 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 POTEJP0CG39 1038 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 IL2RBP14784 551 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 SERPINB4P48594 390 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 OCRLQ01968 901 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 HYIQ5T013 277 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 SEL1L2Q5TEA6 688 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 POTEEQ6S8J3 1075 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 PTPRN2Q92932 1015 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 PWWP2AQ96N64 755 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 STK33Q9BYT3 514 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 GPR88Q9GZN0 384 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 CHORDC1Q9UHD1 332 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-208ENST00000486641 LGALS13Q9UHV8 139 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 PCDHA12Q9UN75 941 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 DCCP43146 1447 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 CLIC2O15247 247 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 THAP12O43422 761 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 MARCH6O60337 910 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 SPAG7O75391 227 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 TCEA3O75764 348 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 KRT36O76013 467 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 ASMTLO95671 621 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 ECEL1O95672 775 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 COMTP21964 271 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 LLGL1Q15334 1064 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 RBM26Q5T8P6 1007 aaKnown RBP11.38□□□□□ -0.59
CCDC171-208ENST00000486641 PRUNE1Q86TP1 453 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 SLC13A5Q86YT5 568 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-208ENST00000486641 MARCH10Q8NA82 808 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-208ENST00000486641 C10orf82Q8WW14 230 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 DTNBP1Q96EV8 351 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 GBP5Q96PP8 586 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 NDNQ99608 321 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 DDX50Q9BQ39 737 aaKnown RBP11.38□□□□□ -0.59
CCDC171-208ENST00000486641 CADM1Q9BY67 442 aaKnown RBP11.38□□□□□ -0.59
CCDC171-208ENST00000486641 WHRNQ9P202 907 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 DDX25Q9UHL0 483 aaKnown RBP11.38□□□□□ -0.59
CCDC171-208ENST00000486641 PCDHB13Q9Y5F0 798 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 NUMBLQ9Y6R0 609 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 TOGARAM1Q9Y4F4 1720 aa11.38□□□□□ -0.59
CCDC171-208ENST00000486641 ESYT2A0FGR8 921 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 FAM47DPA6NHR8 397 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 RASA4BC9J798 803 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 RASA4O43374 803 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 CALUO43852 315 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-208ENST00000486641 NR3C1P04150 777 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 CYP1A1P04798 512 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-208ENST00000486641 PSMC4P43686 418 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 TNNI2P48788 182 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 KRT17Q04695 432 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 UBE4AQ14139 1066 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 MESDQ14696 234 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 CERKLQ49MI3 558 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-208ENST00000486641 ACSBG2Q5FVE4 666 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 SPTY2D1Q68D10 685 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-208ENST00000486641 C11orf63Q6NUN7 778 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 LRRC74BQ6ZQY2 392 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 SDCCAG8Q86SQ7 713 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-208ENST00000486641 CPNE8Q86YQ8 564 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 RHOT2Q8IXI1 618 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 AZIN2Q96A70 460 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 FAM192AQ9GZU8 254 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 DHX36Q9H2U1 1008 aaKnown RBP11.37□□□□□ -0.59
CCDC171-208ENST00000486641 DNAJC18Q9H819 358 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 METTL14Q9HCE5 456 aaKnown RBP11.37□□□□□ -0.59
CCDC171-208ENST00000486641 NINJ2Q9NZG7 142 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 LNPEPQ9UIQ6 1025 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 MTUS1Q9ULD2 1270 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 GRID1Q9ULK0 1009 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 PDLIM1O00151 329 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 PDXKO00764 312 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 CAPN9O14815 690 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 CREB3O43889 395 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 EDF1O60869 148 aaKnown RBP11.37□□□□□ -0.59
CCDC171-208ENST00000486641 TBX10O75333 385 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 ITIH2P19823 946 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 KLRK1P26718 216 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 ADCY7P51828 1080 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 SLC12A3P55017 1021 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 HADHBP55084 474 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms