RNA–Protein interactions for RNA: ENST00000486042.1

PHC3-211, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-211ENST00000486042 SMG7Q92540 1137 aaKnown RBP4.83□□□□□ -1.64
PHC3-211ENST00000486042 SPATA5L1Q9BVQ7 753 aa4.83□□□□□ -1.64
PHC3-211ENST00000486042 WDR11Q9BZH6 1224 aa4.83□□□□□ -1.64
PHC3-211ENST00000486042 KCNH6Q9H252 994 aa4.83□□□□□ -1.64
PHC3-211ENST00000486042 H2AFY2Q9P0M6 372 aaPredicted RBP4.83□□□□□ -1.64
PHC3-211ENST00000486042 MYADML2A6NDP7 307 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 IKBKBO14920 756 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 NPEPPSP55786 919 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 IRF9Q00978 393 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 ITKQ08881 620 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 FOXF2Q12947 444 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 MTMR1Q13613 665 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 DGKDQ16760 1214 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 ODR4Q5SWX8 454 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 RTN4RL1Q86UN2 441 aaPredicted RBP4.82□□□□□ -1.64
PHC3-211ENST00000486042 PASD1Q8IV76 773 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 CMTM4Q8IZR5 234 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 BOLLQ8N9W6 283 aaKnown RBP4.82□□□□□ -1.64
PHC3-211ENST00000486042 SIMC1Q8NDZ2 872 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 COG1Q8WTW3 980 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 FOXRED1Q96CU9 486 aaPredicted RBP4.82□□□□□ -1.64
PHC3-211ENST00000486042 MTMR8Q96EF0 704 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 FOXB1Q99853 325 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 LRFN3Q9BTN0 628 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 PUS7LQ9H0K6 701 aaKnown RBP4.82□□□□□ -1.64
PHC3-211ENST00000486042 G3BP2Q9UN86 482 aaKnown RBP4.82□□□□□ -1.64
PHC3-211ENST00000486042 SPO11Q9Y5K1 396 aa4.82□□□□□ -1.64
PHC3-211ENST00000486042 COL3A1P02461 1466 aaPredicted RBP4.81□□□□□ -1.64
PHC3-211ENST00000486042 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.81□□□□□ -1.64
PHC3-211ENST00000486042 AHRRA9YTQ3 701 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 DVL2O14641 736 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 TGM5O43548 720 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 LPXNO60711 386 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 HIP1RO75146 1068 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 ULK1O75385 1050 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 PRKD3O94806 890 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 SLC9A1P19634 815 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 SEC24CP53992 1094 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 ANTXR2P58335 489 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 ZNF174Q15697 407 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 CC2D1AQ6P1N0 951 aaPredicted RBP4.81□□□□□ -1.64
PHC3-211ENST00000486042 CNTD1Q8N815 330 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 KIAA1958Q8N8K9 716 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 ASPSCR1Q9BZE9 553 aa4.81□□□□□ -1.64
PHC3-211ENST00000486042 CCDC8Q9H0W5 538 aaPredicted RBP4.81□□□□□ -1.64
PHC3-211ENST00000486042 ZNF768Q9H5H4 540 aaKnown RBP4.81□□□□□ -1.64
PHC3-211ENST00000486042 SETD1BQ9UPS6 1966 aaKnown RBP4.81□□□□□ -1.64
PHC3-211ENST00000486042 POLR2AP24928 1970 aaKnown RBP4.8□□□□□ -1.64
PHC3-211ENST00000486042 MARCH6O60337 910 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 ALDH1L1O75891 902 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 HKR1P10072 659 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 HK1P19367 917 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 KIF11P52732 1056 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 SESN3P58005 492 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 KRTAP10-6P60371 365 aaPredicted RBP4.8□□□□□ -1.64
PHC3-211ENST00000486042 FAPQ12884 760 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 TMEM132BQ14DG7 1078 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 DDB1Q16531 1140 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 SRRM1Q8IYB3 904 aaKnown RBP4.8□□□□□ -1.64
PHC3-211ENST00000486042 JDP2Q8WYK2 163 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 SLC5A5Q92911 643 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 CAVIN3Q969G5 261 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 ELF4Q99607 663 aaPredicted RBP4.8□□□□□ -1.64
PHC3-211ENST00000486042 PDCD2LQ9BRP1 358 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 TOMM22Q9NS69 142 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 ANKFY1Q9P2R3 1169 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 EIF2B4Q9UI10 523 aaKnown RBP4.8□□□□□ -1.64
PHC3-211ENST00000486042 MAGEL2Q9UJ55 1249 aa4.8□□□□□ -1.64
PHC3-211ENST00000486042 THRAP3Q9Y2W1 955 aaKnown RBP4.8□□□□□ -1.64
PHC3-211ENST00000486042 GAGE12BA1L429 117 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 GAGE12HA6NDE8 117 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 DAPK3O43293 454 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 ONECUT2O95948 504 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 CXCR5P32302 372 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 LSP1P33241 339 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 FNTBP49356 437 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 BLOC1S1P78537 153 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 NHLH1Q02575 133 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 TTF1Q15361 905 aaPredicted RBP4.79□□□□□ -1.64
PHC3-211ENST00000486042 TERF2Q15554 542 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 BROXQ5VW32 411 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 CMTR2Q8IYT2 770 aaKnown RBP4.79□□□□□ -1.64
PHC3-211ENST00000486042 CLRN3Q8NCR9 226 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 OR5AN1Q8NGI8 311 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 SLC9A6Q92581 669 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 E2F7Q96AV8 911 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 WDR92Q96MX6 357 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 SMAD5Q99717 465 aaKnown RBP4.79□□□□□ -1.64
PHC3-211ENST00000486042 PCIF1Q9H4Z3 704 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 C14orf93Q9H972 538 aaKnown RBP4.79□□□□□ -1.64
PHC3-211ENST00000486042 VTA1Q9NP79 307 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 ACSS2Q9NR19 701 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 RNF7Q9UBF6 113 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 DKK2Q9UBU2 259 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 TRHDEQ9UKU6 1024 aa4.79□□□□□ -1.64
PHC3-211ENST00000486042 K7ESF4 209 aa4.78□□□□□ -1.64
PHC3-211ENST00000486042 RNASET2O00584 256 aaKnown RBP4.78□□□□□ -1.64
PHC3-211ENST00000486042 GABRDO14764 452 aa4.78□□□□□ -1.64
PHC3-211ENST00000486042 MTSS1O43312 755 aa4.78□□□□□ -1.64
PHC3-211ENST00000486042 PARNO95453 639 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms