RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 MKI67P46013 3256 aaKnown RBP19.19■□□□□ 0.66
CHMP3-207ENST00000485465 KIAA0391O15091 583 aaKnown RBP19.19■□□□□ 0.66
CHMP3-207ENST00000485465 NPTXRO95502 500 aa19.19■□□□□ 0.66
CHMP3-207ENST00000485465 HARSP12081 509 aaKnown RBP19.19■□□□□ 0.66
CHMP3-207ENST00000485465 SYN1P17600 705 aa19.19■□□□□ 0.66
CHMP3-207ENST00000485465 NR2F2P24468 414 aa19.19■□□□□ 0.66
CHMP3-207ENST00000485465 CYP2J2P51589 502 aa19.19■□□□□ 0.66
CHMP3-207ENST00000485465 ADAM9Q13443 819 aa19.19■□□□□ 0.66
CHMP3-207ENST00000485465 TCTN1Q2MV58 587 aa19.19■□□□□ 0.66
CHMP3-207ENST00000485465 CNKSR3Q6P9H4 555 aa19.19■□□□□ 0.66
CHMP3-207ENST00000485465 CSGALNACT2Q8N6G5 542 aa19.19■□□□□ 0.66
CHMP3-207ENST00000485465 AOPEPQ8N6M6 819 aa19.19■□□□□ 0.66
CHMP3-207ENST00000485465 ADAM2Q99965 735 aa19.19■□□□□ 0.66
CHMP3-207ENST00000485465 EIF2AQ9BY44 585 aaKnown RBP19.19■□□□□ 0.66
CHMP3-207ENST00000485465 CBX8Q9HC52 389 aa19.19■□□□□ 0.66
CHMP3-207ENST00000485465 PCDH10Q9P2E7 1040 aa19.19■□□□□ 0.66
CHMP3-207ENST00000485465 CETN3O15182 167 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 OGTO15294 1046 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 PFKMP08237 780 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 MYL5Q02045 173 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 PPIGQ13427 754 aaKnown RBP eCLIP19.18■□□□□ 0.66
CHMP3-207ENST00000485465 IQCB1Q15051 598 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 TPD52L1Q16890 204 aaPredicted RBP19.18■□□□□ 0.66
CHMP3-207ENST00000485465 LRRC55Q6ZSA7 311 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 RTN4RL1Q86UN2 441 aaPredicted RBP19.18■□□□□ 0.66
CHMP3-207ENST00000485465 DHX40Q8IX18 779 aaKnown RBP19.18■□□□□ 0.66
CHMP3-207ENST00000485465 XXYLT1Q8NBI6 393 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 FAM200AQ8TCP9 573 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 SAAL1Q96ER3 474 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 TRAIPQ9BWF2 469 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 SRRTQ9BXP5 876 aaKnown RBP19.18■□□□□ 0.66
CHMP3-207ENST00000485465 IL23AQ9NPF7 189 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 RGS18Q9NS28 235 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 NR2E3Q9Y5X4 410 aa19.18■□□□□ 0.66
CHMP3-207ENST00000485465 SCN5AQ14524 2016 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 GOLGA8IPA6NC78 632 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 GOLGA8JA6NMD2 632 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 SMTNL1A8MU46 457 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 IKBKBO14920 756 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 EXTL3O43909 919 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 FAM189A1O60320 539 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 EXOC3O60645 756 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 FGFR1OPO95684 399 aaKnown RBP19.17■□□□□ 0.66
CHMP3-207ENST00000485465 LDHAP00338 332 aaKnown RBP19.17■□□□□ 0.66
CHMP3-207ENST00000485465 FPGSQ05932 587 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 NCAPHQ15003 741 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 GPD1LQ8N335 351 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 ZSWIM2Q8NEG5 633 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 NOC3LQ8WTT2 800 aaKnown RBP19.17■□□□□ 0.66
CHMP3-207ENST00000485465 LINC01599Q8WXQ3 324 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 EEF2KMTQ96G04 330 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 FBXL18Q96ME1 805 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 CEP63Q96MT8 703 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 FAM213AQ9BRX8 229 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 TRIM6Q9C030 488 aaPredicted RBP19.17■□□□□ 0.66
CHMP3-207ENST00000485465 TSPYL2Q9H2G4 693 aaPredicted RBP19.17■□□□□ 0.66
CHMP3-207ENST00000485465 KIAA1586Q9HCI6 787 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 FAM105AQ9NUU6 356 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 NFE2L3Q9Y4A8 694 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 PCDHB2Q9Y5E7 798 aa19.17■□□□□ 0.66
CHMP3-207ENST00000485465 BECN2A8MW95 431 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 ENPP3O14638 875 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 GRM5P41594 1212 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 IKBKEQ14164 716 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 HSP90AA2PQ14568 343 aaPredicted RBP19.16■□□□□ 0.66
CHMP3-207ENST00000485465 KYAT1Q16773 422 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 SEZ6Q53EL9 994 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 ZBTB41Q5SVQ8 909 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 CEP135Q66GS9 1140 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 FILIP1Q7Z7B0 1213 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 GAS2L3Q86XJ1 694 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 THNSL1Q8IYQ7 743 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 SMG8Q8ND04 991 aaKnown RBP19.16■□□□□ 0.66
CHMP3-207ENST00000485465 C1orf112Q9NSG2 853 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 FRMD4BQ9Y2L6 1034 aa19.16■□□□□ 0.66
CHMP3-207ENST00000485465 A0A0U1RQF3 1178 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 C9IYK1 514 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 ZNF623O75123 536 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 AKAP3O75969 853 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 STAG3L1P0CL83 205 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 ACRP10323 421 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 SKIP12755 728 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 CASP4P49662 377 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 ACOT2P49753 483 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 RAB27AP51159 221 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 FAM189BP81408 668 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 CRELD2Q6UXH1 353 aaPredicted RBP19.15■□□□□ 0.66
CHMP3-207ENST00000485465 SLC24A5Q71RS6 500 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 MRPL10Q7Z7H8 261 aaKnown RBP19.15■□□□□ 0.66
CHMP3-207ENST00000485465 LUZP1Q86V48 1076 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 PIAS4Q8N2W9 510 aaPredicted RBP19.15■□□□□ 0.66
CHMP3-207ENST00000485465 CEP120Q8N960 986 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 RDH13Q8NBN7 331 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 LBHD1Q9BQE6 289 aaPredicted RBP19.15■□□□□ 0.66
CHMP3-207ENST00000485465 NXF3Q9H4D5 531 aaKnown RBP19.15■□□□□ 0.66
CHMP3-207ENST00000485465 THAP9Q9H5L6 903 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 FANCLQ9NW38 375 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 CPSF3Q9UKF6 684 aaKnown RBP19.15■□□□□ 0.66
CHMP3-207ENST00000485465 IPPQ9Y573 584 aa19.15■□□□□ 0.66
CHMP3-207ENST00000485465 ABHD14A-ACY1A0A1B0GW23 586 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms