RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 TTI2Q6NXR4 508 aa20.24■□□□□ 0.83
ERCC2-205ENST00000485403 SLC24A5Q71RS6 500 aa20.24■□□□□ 0.83
ERCC2-205ENST00000485403 TAS1R3Q7RTX0 852 aa20.24■□□□□ 0.83
ERCC2-205ENST00000485403 TOP1MTQ969P6 601 aa20.24■□□□□ 0.83
ERCC2-205ENST00000485403 HVCN1Q96D96 273 aa20.24■□□□□ 0.83
ERCC2-205ENST00000485403 KCTD10Q9H3F6 313 aa20.24■□□□□ 0.83
ERCC2-205ENST00000485403 TMEM134Q9H6X4 195 aa20.24■□□□□ 0.83
ERCC2-205ENST00000485403 NFE2L3Q9Y4A8 694 aa20.24■□□□□ 0.83
ERCC2-205ENST00000485403 CHD7Q9P2D1 2997 aa20.24■□□□□ 0.83
ERCC2-205ENST00000485403 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.23■□□□□ 0.83
ERCC2-205ENST00000485403 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.23■□□□□ 0.83
ERCC2-205ENST00000485403 ACKR2O00590 384 aa20.23■□□□□ 0.83
ERCC2-205ENST00000485403 B4GALT5O43286 388 aa20.23■□□□□ 0.83
ERCC2-205ENST00000485403 ARF4P18085 180 aaPredicted RBP20.23■□□□□ 0.83
ERCC2-205ENST00000485403 SCP2P22307 547 aa20.23■□□□□ 0.83
ERCC2-205ENST00000485403 FAM189BP81408 668 aa20.23■□□□□ 0.83
ERCC2-205ENST00000485403 HERC6Q8IVU3 1022 aa20.23■□□□□ 0.83
ERCC2-205ENST00000485403 SYCP3Q8IZU3 236 aa20.23■□□□□ 0.83
ERCC2-205ENST00000485403 TMEM206Q9H813 350 aa20.23■□□□□ 0.83
ERCC2-205ENST00000485403 TBX20Q9UMR3 447 aa20.23■□□□□ 0.83
ERCC2-205ENST00000485403 EXOC7Q9UPT5 735 aa20.23■□□□□ 0.83
ERCC2-205ENST00000485403 MYO9BQ13459 2157 aa20.23■□□□□ 0.83
ERCC2-205ENST00000485403 K7ERI5 159 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 CALUO43852 315 aaPredicted RBP20.22■□□□□ 0.83
ERCC2-205ENST00000485403 GJB5O95377 273 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 EDN1P05305 212 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 PRKCBP05771 671 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 MRE11P49959 708 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 LRRC63Q05C16 580 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 CCDC51Q96ER9 411 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 DUSP9Q99956 384 aaKnown RBP20.22■□□□□ 0.83
ERCC2-205ENST00000485403 TYW1Q9NV66 732 aaKnown RBP20.22■□□□□ 0.83
ERCC2-205ENST00000485403 FANCLQ9NW38 375 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 A0A0U1RQF3 1178 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 A0A1B0GUA9 196 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 TTLL13PA6NNM8 815 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 SMAD3P84022 425 aaKnown RBP20.22■□□□□ 0.83
ERCC2-205ENST00000485403 NCBP1Q09161 790 aaKnown RBP20.22■□□□□ 0.83
ERCC2-205ENST00000485403 HABP4Q5JVS0 413 aaKnown RBP20.22■□□□□ 0.83
ERCC2-205ENST00000485403 NOTUMQ6P988 496 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 FOXR2Q6PJQ5 311 aa20.22■□□□□ 0.83
ERCC2-205ENST00000485403 TMCO2Q7Z6W1 182 aaPredicted RBP20.22■□□□□ 0.83
ERCC2-205ENST00000485403 COL4A6Q14031 1691 aa20.21■□□□□ 0.83
ERCC2-205ENST00000485403 GRXCR1A8MXD5 290 aa20.21■□□□□ 0.83
ERCC2-205ENST00000485403 PDXKO00764 312 aa20.21■□□□□ 0.83
ERCC2-205ENST00000485403 STRN3Q13033 797 aa20.21■□□□□ 0.83
ERCC2-205ENST00000485403 PRPF4BQ13523 1007 aaKnown RBP20.21■□□□□ 0.83
ERCC2-205ENST00000485403 ZCWPW2Q504Y3 356 aa20.21■□□□□ 0.83
ERCC2-205ENST00000485403 UBXN11Q5T124 520 aa20.21■□□□□ 0.83
ERCC2-205ENST00000485403 TWF2Q6IBS0 349 aaKnown RBP20.21■□□□□ 0.83
ERCC2-205ENST00000485403 NPAS4Q8IUM7 802 aa20.21■□□□□ 0.83
ERCC2-205ENST00000485403 MAP4K3Q8IVH8 894 aa20.21■□□□□ 0.83
ERCC2-205ENST00000485403 CSGALNACT2Q8N6G5 542 aa20.21■□□□□ 0.83
ERCC2-205ENST00000485403 NOC3LQ8WTT2 800 aaKnown RBP20.21■□□□□ 0.83
ERCC2-205ENST00000485403 CPB2Q96IY4 423 aa20.21■□□□□ 0.83
ERCC2-205ENST00000485403 GBP3Q9H0R5 595 aa20.21■□□□□ 0.83
ERCC2-205ENST00000485403 ELAC1Q9H777 363 aaKnown RBP20.21■□□□□ 0.83
ERCC2-205ENST00000485403 TRAF3IP3Q9Y228 551 aa20.21■□□□□ 0.83
ERCC2-205ENST00000485403 FNDC1Q4ZHG4 1894 aaPredicted RBP20.21■□□□□ 0.83
ERCC2-205ENST00000485403 ZMYM2Q9UBW7 1377 aa20.2■□□□□ 0.82
ERCC2-205ENST00000485403 TGFB1I1O43294 461 aa20.2■□□□□ 0.82
ERCC2-205ENST00000485403 ZNF623O75123 536 aa20.2■□□□□ 0.82
ERCC2-205ENST00000485403 HTRA4P83105 476 aaPredicted RBP20.2■□□□□ 0.82
ERCC2-205ENST00000485403 EDRF1Q3B7T1 1238 aa20.2■□□□□ 0.82
ERCC2-205ENST00000485403 HS2ST1Q7LGA3 356 aa20.2■□□□□ 0.82
ERCC2-205ENST00000485403 ZNF598Q86UK7 904 aaKnown RBP20.2■□□□□ 0.82
ERCC2-205ENST00000485403 SRRTQ9BXP5 876 aaKnown RBP20.2■□□□□ 0.82
ERCC2-205ENST00000485403 RC3H2Q9HBD1 1191 aaKnown RBP20.2■□□□□ 0.82
ERCC2-205ENST00000485403 SAMSN1Q9NSI8 373 aaKnown RBP20.2■□□□□ 0.82
ERCC2-205ENST00000485403 FAM105AQ9NUU6 356 aa20.2■□□□□ 0.82
ERCC2-205ENST00000485403 TMEM161AQ9NX61 479 aa20.2■□□□□ 0.82
ERCC2-205ENST00000485403 FGFR1OPO95684 399 aaKnown RBP20.19■□□□□ 0.82
ERCC2-205ENST00000485403 ATF7P17544 494 aaPredicted RBP20.19■□□□□ 0.82
ERCC2-205ENST00000485403 RAB27AP51159 221 aa20.19■□□□□ 0.82
ERCC2-205ENST00000485403 ECHDC2Q86YB7 292 aa20.19■□□□□ 0.82
ERCC2-205ENST00000485403 GOLGA5Q8TBA6 731 aa20.19■□□□□ 0.82
ERCC2-205ENST00000485403 BICD1Q96G01 975 aa20.19■□□□□ 0.82
ERCC2-205ENST00000485403 MRPL4Q9BYD3 311 aaKnown RBP20.19■□□□□ 0.82
ERCC2-205ENST00000485403 PBX4Q9BYU1 374 aa20.19■□□□□ 0.82
ERCC2-205ENST00000485403 HSD3B7Q9H2F3 369 aa20.19■□□□□ 0.82
ERCC2-205ENST00000485403 IKZF4Q9H2S9 585 aa20.19■□□□□ 0.82
ERCC2-205ENST00000485403 THAP9Q9H5L6 903 aa20.19■□□□□ 0.82
ERCC2-205ENST00000485403 PDZD7Q9H5P4 517 aa20.19■□□□□ 0.82
ERCC2-205ENST00000485403 RNF216Q9NWF9 866 aaPredicted RBP20.19■□□□□ 0.82
ERCC2-205ENST00000485403 PCDHA11Q9Y5I1 949 aa20.19■□□□□ 0.82
ERCC2-205ENST00000485403 SOX1O00570 391 aaPredicted RBP20.18■□□□□ 0.82
ERCC2-205ENST00000485403 CLIC2O15247 247 aa20.18■□□□□ 0.82
ERCC2-205ENST00000485403 STAG3L1P0CL83 205 aa20.18■□□□□ 0.82
ERCC2-205ENST00000485403 SKIP12755 728 aa20.18■□□□□ 0.82
ERCC2-205ENST00000485403 DEKP35659 375 aaKnown RBP20.18■□□□□ 0.82
ERCC2-205ENST00000485403 FKBP3Q00688 224 aaKnown RBP20.18■□□□□ 0.82
ERCC2-205ENST00000485403 SLC27A1Q6PCB7 646 aa20.18■□□□□ 0.82
ERCC2-205ENST00000485403 USP20Q9Y2K6 914 aa20.18■□□□□ 0.82
ERCC2-205ENST00000485403 N4BP3O15049 544 aa20.17■□□□□ 0.82
ERCC2-205ENST00000485403 DGKIO75912 1065 aa20.17■□□□□ 0.82
ERCC2-205ENST00000485403 UPP2O95045 317 aa20.17■□□□□ 0.82
ERCC2-205ENST00000485403 EOMESO95936 686 aa20.17■□□□□ 0.82
ERCC2-205ENST00000485403 NR3C1P04150 777 aa20.17■□□□□ 0.82
ERCC2-205ENST00000485403 CDK11BP21127 795 aaKnown RBP20.17■□□□□ 0.82
ERCC2-205ENST00000485403 RPL13P26373 211 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms