RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 FAM83AQ86UY5 434 aa21.17■□□□□ 0.98
LIMS2-215ENST00000484252 IL31RAQ8NI17 732 aa21.17■□□□□ 0.98
LIMS2-215ENST00000484252 FBXO25Q8TCJ0 367 aa21.17■□□□□ 0.98
LIMS2-215ENST00000484252 RNF187Q5TA31 235 aaPredicted RBP21.16■□□□□ 0.98
LIMS2-215ENST00000484252 RPAINQ86UA6 219 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 KREMEN1Q96MU8 473 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 TMEM109Q9BVC6 243 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 ANKEF1Q9NU02 776 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 DDX20Q9UHI6 824 aaKnown RBP21.16■□□□□ 0.98
LIMS2-215ENST00000484252 GTF3C4Q9UKN8 822 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 TRPC6Q9Y210 931 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 COQ4Q9Y3A0 265 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 PCDHA3Q9Y5H8 950 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 NFIBO00712 420 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 MARCKSL1P49006 195 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 JAK3P52333 1124 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 PEX3P56589 373 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 GSCP56915 257 aaPredicted RBP21.16■□□□□ 0.98
LIMS2-215ENST00000484252 IFT88Q13099 833 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 SLMAPQ14BN4 828 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 KRT39Q6A163 491 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 AADACL2Q6P093 401 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 CCDC137Q6PK04 289 aaKnown RBP21.16■□□□□ 0.98
LIMS2-215ENST00000484252 PPM1KQ8N3J5 372 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 ZNF564Q8TBZ8 553 aaPredicted RBP21.16■□□□□ 0.98
LIMS2-215ENST00000484252 KAT5Q92993 513 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 ACTR5Q9H9F9 607 aaPredicted RBP21.16■□□□□ 0.98
LIMS2-215ENST00000484252 VEZTQ9HBM0 779 aa21.16■□□□□ 0.98
LIMS2-215ENST00000484252 ASTN2O75129 1339 aaPredicted RBP21.15■□□□□ 0.98
LIMS2-215ENST00000484252 DCDC2CA8MYV0 355 aa21.15■□□□□ 0.98
LIMS2-215ENST00000484252 H0YHG0 523 aa21.15■□□□□ 0.98
LIMS2-215ENST00000484252 SLC16A4O15374 487 aa21.15■□□□□ 0.98
LIMS2-215ENST00000484252 CYP26A1O43174 497 aa21.15■□□□□ 0.98
LIMS2-215ENST00000484252 CAND2O75155 1236 aa21.15■□□□□ 0.98
LIMS2-215ENST00000484252 ADRB2P07550 413 aa21.15■□□□□ 0.98
LIMS2-215ENST00000484252 RPL21P46778 160 aaKnown RBP21.15■□□□□ 0.98
LIMS2-215ENST00000484252 PSMC5P62195 406 aa21.15■□□□□ 0.98
LIMS2-215ENST00000484252 MRPS9P82933 396 aaKnown RBP21.15■□□□□ 0.98
LIMS2-215ENST00000484252 FMO1Q01740 532 aa21.15■□□□□ 0.98
LIMS2-215ENST00000484252 SNRNP35Q16560 246 aaKnown RBP21.15■□□□□ 0.98
LIMS2-215ENST00000484252 CYFIP1Q7L576 1253 aa21.15■□□□□ 0.98
LIMS2-215ENST00000484252 SLC13A5Q86YT5 568 aaPredicted RBP21.15■□□□□ 0.98
LIMS2-215ENST00000484252 NUP85Q9BW27 656 aa21.15■□□□□ 0.98
LIMS2-215ENST00000484252 GLIS2Q9BZE0 524 aaPredicted RBP21.15■□□□□ 0.98
LIMS2-215ENST00000484252 TMEM8AQ9HCN3 771 aa21.15■□□□□ 0.98
LIMS2-215ENST00000484252 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.15■□□□□ 0.98
LIMS2-215ENST00000484252 BACH1O14867 736 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 WDR46O15213 610 aaKnown RBP21.14■□□□□ 0.98
LIMS2-215ENST00000484252 SPOPO43791 374 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 SFNP31947 248 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 GTF2H1P32780 548 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 GPC3P51654 580 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 SMTNP53814 917 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 CDR2Q01850 454 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 MAP3K10Q02779 954 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 ACTN3Q08043 901 aaPredicted RBP21.14■□□□□ 0.98
LIMS2-215ENST00000484252 ADCY2Q08462 1091 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 C6orf118Q5T5N4 469 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 TTC27Q6P3X3 843 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 CCDC121Q6ZUS5 278 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 USP37Q86T82 979 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 C12orf50Q8NA57 414 aaPredicted RBP21.14■□□□□ 0.98
LIMS2-215ENST00000484252 TMC2Q8TDI7 906 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 KIFAP3Q92845 792 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 BCS1LQ9Y276 419 aa21.14■□□□□ 0.98
LIMS2-215ENST00000484252 SHBGP04278 402 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 PYGMP11217 842 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 COILP38432 576 aaPredicted RBP21.14■□□□□ 0.97
LIMS2-215ENST00000484252 PDE6CP51160 858 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 MAP2K1Q02750 393 aaPredicted RBP21.14■□□□□ 0.97
LIMS2-215ENST00000484252 ENPEPQ07075 957 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 ERMARDQ5T6L9 678 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 MIGA2Q7L4E1 593 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 SLC47A2Q86VL8 602 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 CACNA2D3Q8IZS8 1091 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 MTMR14Q8NCE2 650 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 SYTL5Q8TDW5 730 aaPredicted RBP21.14■□□□□ 0.97
LIMS2-215ENST00000484252 P3H4Q92791 437 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 TATDN2Q93075 761 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 RNF25Q96BH1 459 aaPredicted RBP21.14■□□□□ 0.97
LIMS2-215ENST00000484252 NT5C1BQ96P26 610 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 XPO6Q96QU8 1125 aaKnown RBP21.14■□□□□ 0.97
LIMS2-215ENST00000484252 PLVAPQ9BX97 442 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 TMEM39BQ9GZU3 492 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 STMN4Q9H169 189 aaPredicted RBP21.14■□□□□ 0.97
LIMS2-215ENST00000484252 TBX20Q9UMR3 447 aa21.14■□□□□ 0.97
LIMS2-215ENST00000484252 PASKQ96RG2 1323 aa21.13■□□□□ 0.97
LIMS2-215ENST00000484252 WDR64B1ANS9 1081 aa21.13■□□□□ 0.97
LIMS2-215ENST00000484252 MMEP08473 750 aa21.13■□□□□ 0.97
LIMS2-215ENST00000484252 CYP11B1P15538 503 aa21.13■□□□□ 0.97
LIMS2-215ENST00000484252 HNRNPH1P31943 449 aaKnown RBP21.13■□□□□ 0.97
LIMS2-215ENST00000484252 RWDD2BP57060 319 aa21.13■□□□□ 0.97
LIMS2-215ENST00000484252 SPP2Q13103 211 aa21.13■□□□□ 0.97
LIMS2-215ENST00000484252 KCTD19Q17RG1 926 aaPredicted RBP21.13■□□□□ 0.97
LIMS2-215ENST00000484252 MAP4K3Q8IVH8 894 aa21.13■□□□□ 0.97
LIMS2-215ENST00000484252 ZSWIM2Q8NEG5 633 aa21.13■□□□□ 0.97
LIMS2-215ENST00000484252 LPAR1Q92633 364 aa21.13■□□□□ 0.97
LIMS2-215ENST00000484252 ZNF653Q96CK0 615 aa21.13■□□□□ 0.97
LIMS2-215ENST00000484252 SEC16BQ96JE7 1060 aa21.13■□□□□ 0.97
LIMS2-215ENST00000484252 PNMA2Q9UL42 364 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms