RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PHRF1Q9P1Y6 1649 aaKnown RBP13.59□□□□□ -0.23
VPS52-218ENST00000482399 RPTORQ8N122 1335 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 CLRN2A0PK11 232 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 MEIS2O14770 477 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 CETN2P41208 172 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 IL9RQ01113 521 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 PRR5LQ6MZQ0 368 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 PADI6Q6TGC4 694 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 ARHGEF18Q6ZSZ5 1173 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 ZSWIM2Q8NEG5 633 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 LRRC8CQ8TDW0 803 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 P3H4Q92791 437 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 ATP6V0A4Q9HBG4 840 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 TCP10L2B9ZVM9 353 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 PPIP5K2O43314 1243 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 TNNI1P19237 187 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 YY1P25490 414 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 TM4SF1P30408 202 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 GBP1P32455 592 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 MMP13P45452 471 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 ZDHHC24Q6UX98 284 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 CROCCP2Q86T23 111 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 LONP2Q86WA8 852 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 FAM20AQ96MK3 541 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 NACC1Q96RE7 527 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 C11orf70Q9BRQ4 267 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 KCNMB3Q9NPA1 279 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 TOPORSQ9NS56 1045 aaPredicted RBP13.59□□□□□ -0.23
VPS52-218ENST00000482399 C15orf41Q9Y2V0 281 aa13.59□□□□□ -0.23
VPS52-218ENST00000482399 SLIT2O94813 1529 aa13.58□□□□□ -0.23
VPS52-218ENST00000482399 A0A0G2JND7 137 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 CFAP73A6NFT4 308 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 KIF1CO43896 1103 aaKnown RBP13.58□□□□□ -0.24
VPS52-218ENST00000482399 DNAJC8O75937 253 aaPredicted RBP13.58□□□□□ -0.24
VPS52-218ENST00000482399 POLR2MP0CAP2 368 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 RARGP13631 454 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 SMARCA1P28370 1054 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 SARNPP82979 210 aaKnown RBP13.58□□□□□ -0.24
VPS52-218ENST00000482399 MXRA7P84157 204 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 DPH6Q7L8W6 267 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 SCYL3Q8IZE3 742 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 RASGEF1CQ8N431 466 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 DTX3LQ8TDB6 740 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 PGM2Q96G03 612 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 SLCO1B3Q9NPD5 702 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 KCNQ5Q9NR82 932 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 TRPM3Q9HCF6 1732 aaPredicted RBP13.58□□□□□ -0.24
VPS52-218ENST00000482399 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 CES2O00748 559 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 SLC16A3O15427 465 aaKnown RBP13.58□□□□□ -0.24
VPS52-218ENST00000482399 FOSP01100 380 aaPredicted RBP13.58□□□□□ -0.24
VPS52-218ENST00000482399 PPP3CAQ08209 521 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 OVGP1Q12889 678 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 COL23A1Q86Y22 540 aaPredicted RBP13.58□□□□□ -0.24
VPS52-218ENST00000482399 ANKMY2Q8IV38 441 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 ATXN2LQ8WWM7 1075 aaKnown RBP13.58□□□□□ -0.24
VPS52-218ENST00000482399 POMGNT1Q8WZA1 660 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 KIFAP3Q92845 792 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 TLCD1Q96CP7 247 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 RMDN2Q96LZ7 410 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 ZNF317Q96PQ6 595 aaPredicted RBP13.58□□□□□ -0.24
VPS52-218ENST00000482399 LRRC37BQ96QE4 947 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 TMEM117Q9H0C3 514 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 TDRD3Q9H7E2 651 aaKnown RBP13.58□□□□□ -0.24
VPS52-218ENST00000482399 DNAJC18Q9H819 358 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 SPATA31A1Q5TZJ5 1347 aa13.58□□□□□ -0.24
VPS52-218ENST00000482399 A0A0A6YYK5 440 aaPredicted RBP13.57□□□□□ -0.24
VPS52-218ENST00000482399 DDTLA6NHG4 134 aaPredicted RBP13.57□□□□□ -0.24
VPS52-218ENST00000482399 ASAP2O43150 1006 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 HSPA6P17066 643 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 NCALDP61601 193 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 AP3B2Q13367 1082 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 XKR9Q5GH70 373 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 NUDCD1Q96RS6 583 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 P2RX7Q99572 595 aaKnown RBP13.57□□□□□ -0.24
VPS52-218ENST00000482399 ZDHHC18Q9NUE0 388 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 SMIM24O75264 130 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 GJB6O95452 261 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 VCAM1P19320 739 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 CALRP27797 417 aaKnown RBP13.57□□□□□ -0.24
VPS52-218ENST00000482399 MARSP56192 900 aaKnown RBP13.57□□□□□ -0.24
VPS52-218ENST00000482399 ZNF394Q53GI3 561 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 IZUMO3Q5VZ72 239 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 MIGA2Q7L4E1 593 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 ZNF720Q7Z2F6 126 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 CBWD2Q8IUF1 395 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 FITM2Q8N6M3 262 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 C3orf20Q8ND61 904 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 MCUR1Q96AQ8 359 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 OSBPL1AQ9BXW6 950 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 GRHL1Q9NZI5 618 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.57□□□□□ -0.24
VPS52-218ENST00000482399 STXBP5LQ9Y2K9 1186 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 USP54Q70EL1 1684 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 ATXN2Q99700 1313 aaKnown RBP13.57□□□□□ -0.24
VPS52-218ENST00000482399 SLITRK3O94933 977 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 CBX6O95503 412 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 ARP10275 920 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 STRN3Q13033 797 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 ITIH4Q14624 930 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms