RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 STAG3L1P0CL83 205 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 MAPTP10636 758 aaKnown RBP11.65□□□□□ -0.54
SSBP1-210ENST00000481508 NMT1P30419 496 aaKnown RBP11.65□□□□□ -0.54
SSBP1-210ENST00000481508 NDUFA8P51970 172 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 NCKAP1LP55160 1127 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 ADALQ6DHV7 355 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 AGMOQ6ZNB7 445 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 SV2BQ7L1I2 683 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 SFR1Q86XK3 245 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 HELQQ8TDG4 1101 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 GDPD5Q8WTR4 605 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 SPIRE2Q8WWL2 714 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 ARNTL2Q8WYA1 636 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 CASD1Q96PB1 797 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 C2orf40Q9H1Z8 148 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 IKZF4Q9H2S9 585 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 NXF3Q9H4D5 531 aaKnown RBP11.65□□□□□ -0.54
SSBP1-210ENST00000481508 ZHX3Q9H4I2 956 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 ELAC1Q9H777 363 aaKnown RBP11.65□□□□□ -0.54
SSBP1-210ENST00000481508 PRMT7Q9NVM4 692 aaPredicted RBP11.65□□□□□ -0.54
SSBP1-210ENST00000481508 KBTBD4Q9NVX7 518 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 DACT1Q9NYF0 836 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 SERTAD1Q9UHV2 236 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 KCNH3Q9ULD8 1083 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 ODF2LQ9ULJ1 636 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 IPPQ9Y573 584 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 MYO15AQ9UKN7 3530 aa11.65□□□□□ -0.54
SSBP1-210ENST00000481508 FAM237AA0A1B0GTK4 181 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 A0A1B0GUA9 196 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 B4GALT3O60512 393 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 LPXNO60711 386 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 CMA1P23946 247 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 AXLP30530 894 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 CASP5P51878 434 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 ERVK-21P61565 698 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 PRPF4BQ13523 1007 aaKnown RBP11.64□□□□□ -0.55
SSBP1-210ENST00000481508 BTG3Q14201 252 aaPredicted RBP11.64□□□□□ -0.55
SSBP1-210ENST00000481508 MAPK6Q16659 721 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 ZC2HC1CQ53FD0 456 aaPredicted RBP11.64□□□□□ -0.55
SSBP1-210ENST00000481508 NOTUMQ6P988 496 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 MRPL10Q7Z7H8 261 aaKnown RBP11.64□□□□□ -0.55
SSBP1-210ENST00000481508 CMTR2Q8IYT2 770 aaKnown RBP11.64□□□□□ -0.55
SSBP1-210ENST00000481508 MYCT1Q8N699 235 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 GLIS3Q8NEA6 775 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 HPS3Q969F9 1004 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 PRIMPOLQ96LW4 560 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 NTPCRQ9BSD7 190 aaKnown RBP11.64□□□□□ -0.55
SSBP1-210ENST00000481508 TARS2Q9BW92 718 aaKnown RBP11.64□□□□□ -0.55
SSBP1-210ENST00000481508 APOL6Q9BWW8 343 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 SCAND2PQ9GZW5 306 aaPredicted RBP11.64□□□□□ -0.55
SSBP1-210ENST00000481508 BLZF1Q9H2G9 400 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 TMEM134Q9H6X4 195 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 CWH43Q9H720 699 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 C17orf75Q9HAS0 396 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 FAM13BQ9NYF5 915 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 TBC1D7Q9P0N9 293 aa11.64□□□□□ -0.55
SSBP1-210ENST00000481508 MYO7AQ13402 2215 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 A0A1W2PQ27 194 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 A0A1W2PQ64 194 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 A0A1W2PQD8 194 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 FRMD3A2A2Y4 597 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 K7ENM7 598 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 K7ERI5 159 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 ZNF623O75123 536 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 TBCAO75347 108 aaKnown RBP11.63□□□□□ -0.55
SSBP1-210ENST00000481508 OFD1O75665 1012 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 PBX3P40426 434 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 PCBP1Q15365 356 aaKnown RBP eCLIP11.63□□□□□ -0.55
SSBP1-210ENST00000481508 HAUS6Q7Z4H7 955 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 TMEM192Q8IY95 271 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 FIBCD1Q8N539 461 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 CEP120Q8N960 986 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 FSIP1Q8NA03 581 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 IQUBQ8NA54 791 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 MARVELD3Q96A59 401 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 CCDC51Q96ER9 411 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 ZBTB45Q96K62 511 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-210ENST00000481508 TGS1Q96RS0 853 aaKnown RBP11.63□□□□□ -0.55
SSBP1-210ENST00000481508 ACO2Q99798 780 aaKnown RBP11.63□□□□□ -0.55
SSBP1-210ENST00000481508 TRIM9Q9C026 710 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 HAPLN2Q9GZV7 340 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 TMEM117Q9H0C3 514 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 TNMDQ9H2S6 317 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 PARVGQ9HBI0 331 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 PTPRHQ9HD43 1115 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 TYW1Q9NV66 732 aaKnown RBP11.63□□□□□ -0.55
SSBP1-210ENST00000481508 MIOSQ9NXC5 875 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 CHMP5Q9NZZ3 219 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 INPP5FQ9Y2H2 1132 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 KMT2EQ8IZD2 1858 aa11.63□□□□□ -0.55
SSBP1-210ENST00000481508 ZFHX2Q9C0A1 2572 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-210ENST00000481508 CACNA1GO43497 2377 aa11.62□□□□□ -0.55
SSBP1-210ENST00000481508 TISP43B9A030 160 aa11.62□□□□□ -0.55
SSBP1-210ENST00000481508 MEFVO15553 781 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-210ENST00000481508 TRAK2O60296 914 aa11.62□□□□□ -0.55
SSBP1-210ENST00000481508 GADD45BO75293 160 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-210ENST00000481508 EOMESO95936 686 aa11.62□□□□□ -0.55
SSBP1-210ENST00000481508 MYBP10242 640 aa11.62□□□□□ -0.55
SSBP1-210ENST00000481508 HOXB3P14651 431 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-210ENST00000481508 IDEP14735 1019 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms