RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 EXOC3O60645 756 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 RPS6KA5O75582 802 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 TPM3P06753 285 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 CDK11BP21127 795 aaKnown RBP14.36□□□□□ -0.11
COL4A2-206ENST00000480609 GTF2H1P32780 548 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 CASP4P49662 377 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 COPB1P53618 953 aaKnown RBP14.36□□□□□ -0.11
COL4A2-206ENST00000480609 FAAP100Q0VG06 881 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 NR1I3Q14994 352 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 SURF1Q15526 300 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 SNRNP35Q16560 246 aaKnown RBP14.36□□□□□ -0.11
COL4A2-206ENST00000480609 MIIPQ5JXC2 388 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 ZNF618Q5T7W0 954 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 SLC27A1Q6PCB7 646 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 CRELD2Q6UXH1 353 aaPredicted RBP14.36□□□□□ -0.11
COL4A2-206ENST00000480609 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.36□□□□□ -0.11
COL4A2-206ENST00000480609 FAM186BQ8IYM0 893 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 DIS3LQ8TF46 1054 aaKnown RBP14.36□□□□□ -0.11
COL4A2-206ENST00000480609 PDLIM2Q96JY6 352 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 ADPGKQ9BRR6 497 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 TUBGCP2Q9BSJ2 902 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 NOC4LQ9BVI4 516 aaKnown RBP14.36□□□□□ -0.11
COL4A2-206ENST00000480609 CDT1Q9H211 546 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 ERVK-5Q9HDB9 667 aa14.36□□□□□ -0.11
COL4A2-206ENST00000480609 RTN4Q9NQC3 1192 aaKnown RBP14.36□□□□□ -0.11
COL4A2-206ENST00000480609 CPSF3Q9UKF6 684 aaKnown RBP14.36□□□□□ -0.11
COL4A2-206ENST00000480609 NOC2LQ9Y3T9 749 aaKnown RBP14.36□□□□□ -0.11
COL4A2-206ENST00000480609 A0A1W2PQC6 194 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 ZNF233A6NK53 670 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 LGALS16A8MUM7 142 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 AP5Z1O43299 807 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 ZNF623O75123 536 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 CXCL10P02778 98 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 CLTAP09496 248 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 PBX1P40424 430 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 TLE2Q04725 743 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 TMEM62Q0P6H9 643 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 BFSP1Q12934 665 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 DSC3Q14574 896 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 LPIN1Q14693 890 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 PSMD6Q15008 389 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 BRSK2Q8IWQ3 736 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 CD302Q8IX05 232 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 PARD3BQ8TEW8 1205 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 SLC35C1Q96A29 364 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 PAWRQ96IZ0 340 aaKnown RBP14.35□□□□□ -0.11
COL4A2-206ENST00000480609 ZBTB45Q96K62 511 aaPredicted RBP14.35□□□□□ -0.11
COL4A2-206ENST00000480609 ERGIC2Q96RQ1 377 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 MSTO1Q9BUK6 570 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 ST3GAL5Q9UNP4 418 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 USP20Q9Y2K6 914 aa14.35□□□□□ -0.11
COL4A2-206ENST00000480609 MYCP01106 439 aaPredicted RBP14.34□□□□□ -0.11
COL4A2-206ENST00000480609 TPM2P07951 284 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 GRM5P41594 1212 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 RAB27AP51159 221 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 CYP2J2P51589 502 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 ZNF75DP51815 510 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 AP3M2P53677 418 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 UBASH3AP57075 661 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 CYP24A1Q07973 514 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 MBTPS1Q14703 1052 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 ZNF568Q3ZCX4 644 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 CCDC40Q4G0X9 1142 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 FILIP1LQ4L180 1135 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 EEF1DP3Q658K8 133 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 LRRC8DQ7L1W4 858 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 NT5DC4Q86YG4 428 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 IQCDQ96DY2 449 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 ZNF668Q96K58 619 aaPredicted RBP14.34□□□□□ -0.11
COL4A2-206ENST00000480609 FTHL17Q9BXU8 183 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 ASB7Q9H672 318 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 AGO3Q9H9G7 860 aaKnown RBP14.34□□□□□ -0.11
COL4A2-206ENST00000480609 PLEKHA5Q9HAU0 1116 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 COQ4Q9Y3A0 265 aa14.34□□□□□ -0.11
COL4A2-206ENST00000480609 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.34□□□□□ -0.11
COL4A2-206ENST00000480609 KIAA0355O15063 1070 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 STX10O60499 249 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 N4BP1O75113 896 aaKnown RBP14.33□□□□□ -0.12
COL4A2-206ENST00000480609 SERPINC1P01008 464 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 RFC2P35250 354 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 MTIF2P46199 727 aaKnown RBP14.33□□□□□ -0.12
COL4A2-206ENST00000480609 GPNMBQ14956 572 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 TRIM60Q495X7 471 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 VWA3BQ502W6 1294 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 XKR4Q5GH76 650 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 UBXN11Q5T124 520 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 CEP135Q66GS9 1140 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 MRPL10Q7Z7H8 261 aaKnown RBP14.33□□□□□ -0.12
COL4A2-206ENST00000480609 CBWD2Q8IUF1 395 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 APBB2Q92870 758 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 NAP1L5Q96NT1 182 aaPredicted RBP14.33□□□□□ -0.12
COL4A2-206ENST00000480609 TRIM5Q9C035 493 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 NDST4Q9H3R1 872 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 PCIF1Q9H4Z3 704 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 INTS13Q9NVM9 706 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 PADI3Q9ULW8 664 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 DAAM1Q9Y4D1 1078 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.33□□□□□ -0.12
COL4A2-206ENST00000480609 ITIH6Q6UXX5 1313 aa14.33□□□□□ -0.12
COL4A2-206ENST00000480609 CSDE1O75534 798 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms