RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 CBX6O95503 412 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 ECEL1O95672 775 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 SOX5P35711 763 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 LIN52Q52LA3 116 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 ZNF449Q6P9G9 518 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 FAM47EQ6ZV65 393 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 ZNF365Q70YC5 407 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 EPM2AIP1Q7L775 607 aaPredicted RBP11.39□□□□□ -0.59
SIK3-210ENST00000480468 CCDC105Q8IYK2 499 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 IWS1Q96ST2 819 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 MIPEPQ99797 713 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 CADM1Q9BY67 442 aaKnown RBP11.39□□□□□ -0.59
SIK3-210ENST00000480468 FGFBP2Q9BYJ0 223 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 ASCC2Q9H1I8 757 aaPredicted RBP11.39□□□□□ -0.59
SIK3-210ENST00000480468 AJAP1Q9UKB5 411 aaPredicted RBP11.39□□□□□ -0.59
SIK3-210ENST00000480468 ZNF330Q9Y3S2 320 aaPredicted RBP11.39□□□□□ -0.59
SIK3-210ENST00000480468 ALG6Q9Y672 507 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 UMODL1Q5DID0 1318 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 KDM3AQ9Y4C1 1321 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 CAPN9O14815 690 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 PRPF4O43172 522 aaKnown RBP eCLIP11.38□□□□□ -0.59
SIK3-210ENST00000480468 CCDC166P0CW27 439 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 CDK7P50613 346 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 STAT4Q14765 748 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 PDK4Q16654 411 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 CTC1Q2NKJ3 1217 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 ACSBG2Q5FVE4 666 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 SYDE1Q6ZW31 735 aaPredicted RBP11.38□□□□□ -0.59
SIK3-210ENST00000480468 CCDC125Q86Z20 511 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 GLYCTKQ8IVS8 523 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 REXO1Q8N1G1 1221 aaKnown RBP11.38□□□□□ -0.59
SIK3-210ENST00000480468 DENND1AQ8TEH3 1009 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 ARHGEF26Q96DR7 871 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 CCDC77Q9BR77 488 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 BTBD10Q9BSF8 475 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 CRNKL1Q9BZJ0 848 aaKnown RBP11.38□□□□□ -0.59
SIK3-210ENST00000480468 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 LRRC19Q9H756 370 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 CYLDQ9NQC7 956 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 IL17RBQ9NRM6 502 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 TMOD4Q9NZQ9 345 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 ZFP69BQ9UJL9 534 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 G3BP2Q9UN86 482 aaKnown RBP11.38□□□□□ -0.59
SIK3-210ENST00000480468 NAALADL1Q9UQQ1 740 aa11.38□□□□□ -0.59
SIK3-210ENST00000480468 POTEMA6NI47 508 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 A8MXQ7 604 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 TBX10O75333 385 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 SMARCA1P28370 1054 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 TPP2P29144 1249 aaPredicted RBP11.37□□□□□ -0.59
SIK3-210ENST00000480468 SESN3P58005 492 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 CTTNQ14247 550 aaKnown RBP11.37□□□□□ -0.59
SIK3-210ENST00000480468 SPARCL1Q14515 664 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 C1QTNF12Q5T7M4 302 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 RFWD3Q6PCD5 774 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 SLC13A5Q86YT5 568 aaPredicted RBP11.37□□□□□ -0.59
SIK3-210ENST00000480468 RELL1Q8IUW5 271 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 SRRM1Q8IYB3 904 aaKnown RBP11.37□□□□□ -0.59
SIK3-210ENST00000480468 SYCP3Q8IZU3 236 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 CYP4X1Q8N118 509 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 PPP1R14BQ96C90 147 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 RBM17Q96I25 401 aaKnown RBP11.37□□□□□ -0.59
SIK3-210ENST00000480468 STK33Q9BYT3 514 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 PREBQ9HCU5 417 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 TYW1Q9NV66 732 aaKnown RBP11.37□□□□□ -0.59
SIK3-210ENST00000480468 GCNT4Q9P109 453 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 COG5Q9UP83 839 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 ZNF510Q9Y2H8 683 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 KAT6BQ8WYB5 2073 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 DCCP43146 1447 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 KRT36O76013 467 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 CYP1A1P04798 512 aaPredicted RBP11.37□□□□□ -0.59
SIK3-210ENST00000480468 DNAJC3Q13217 504 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 SIX1Q15475 284 aaPredicted RBP11.37□□□□□ -0.59
SIK3-210ENST00000480468 WDR72Q3MJ13 1102 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 TAF1BQ53T94 588 aaPredicted RBP11.37□□□□□ -0.59
SIK3-210ENST00000480468 HERC4Q5GLZ8 1057 aaPredicted RBP11.37□□□□□ -0.59
SIK3-210ENST00000480468 TMEM63BQ5T3F8 832 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 DSTYKQ6XUX3 929 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 CLNKQ7Z7G1 428 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 ANKRD23Q86SG2 305 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 WNT8AQ9H1J5 351 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 KRT82Q9NSB4 513 aa11.37□□□□□ -0.59
SIK3-210ENST00000480468 SMG5Q9UPR3 1016 aaKnown RBP11.37□□□□□ -0.59
SIK3-210ENST00000480468 hCG_1984214I3L0E3 225 aa11.36□□□□□ -0.59
SIK3-210ENST00000480468 PDXKO00764 312 aa11.36□□□□□ -0.59
SIK3-210ENST00000480468 THAP12O43422 761 aa11.36□□□□□ -0.59
SIK3-210ENST00000480468 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
SIK3-210ENST00000480468 STARD3NLO95772 234 aa11.36□□□□□ -0.59
SIK3-210ENST00000480468 ABHD2P08910 425 aa11.36□□□□□ -0.59
SIK3-210ENST00000480468 PABPC4LP0CB38 370 aaKnown RBP11.36□□□□□ -0.59
SIK3-210ENST00000480468 PIM1P11309 404 aaPredicted RBP11.36□□□□□ -0.59
SIK3-210ENST00000480468 DESP17661 470 aa11.36□□□□□ -0.59
SIK3-210ENST00000480468 TFAP4Q01664 338 aa11.36□□□□□ -0.59
SIK3-210ENST00000480468 PHLDB3Q6NSJ2 640 aa11.36□□□□□ -0.59
SIK3-210ENST00000480468 HS2ST1Q7LGA3 356 aa11.36□□□□□ -0.59
SIK3-210ENST00000480468 NLRP9Q7RTR0 991 aa11.36□□□□□ -0.59
SIK3-210ENST00000480468 ZNF713Q8N859 430 aaPredicted RBP11.36□□□□□ -0.59
SIK3-210ENST00000480468 ZCRB1Q8TBF4 217 aaKnown RBP11.36□□□□□ -0.59
SIK3-210ENST00000480468 ZNF384Q8TF68 577 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms