RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 CDT1Q9H211 546 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 AGO3Q9H9G7 860 aaKnown RBP18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 AGO2Q9UKV8 859 aaKnown RBP18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 GINS2Q9Y248 185 aa18.38■□□□□ 0.53
SCAMP3-207ENST00000480219 GPR182O15218 404 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 EXOC3O60645 756 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 EPB41P11171 864 aaKnown RBP18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 PRKCSHP14314 528 aaPredicted RBP18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 EN2P19622 333 aaPredicted RBP18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 FGFR4P22455 802 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 CYP2J2P51589 502 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 FANCCQ00597 558 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 PPP2R3AQ06190 1150 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 KRT31Q15323 416 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 KYAT1Q16773 422 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 DCAF4L1Q3SXM0 396 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 FAM186BQ8IYM0 893 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 EEF2KMTQ96G04 330 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 MFSD14AQ96MC6 490 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 MSTO1Q9BUK6 570 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 PCIF1Q9H4Z3 704 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 MAGEC2Q9UBF1 373 aaPredicted RBP18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 ST3GAL5Q9UNP4 418 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 FRMD4BQ9Y2L6 1034 aa18.37■□□□□ 0.53
SCAMP3-207ENST00000480219 A0A1B0GTH6 734 aa18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 ADRB2P07550 413 aa18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 DSC3Q14574 896 aa18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 GPNMBQ14956 572 aa18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 SNRNP35Q16560 246 aaKnown RBP18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 ZNF568Q3ZCX4 644 aa18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 SLC27A1Q6PCB7 646 aa18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 INTS8Q75QN2 995 aaKnown RBP18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 APBB1IPQ7Z5R6 666 aaPredicted RBP18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 ZSWIM2Q8NEG5 633 aa18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 CPB2Q96IY4 423 aa18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 OSBPL7Q9BZF2 842 aa18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 ANKFY1Q9P2R3 1169 aa18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 ARMCX3Q9UH62 379 aaPredicted RBP18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 CPSF3Q9UKF6 684 aaKnown RBP18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 PADI3Q9ULW8 664 aa18.36■□□□□ 0.53
SCAMP3-207ENST00000480219 CXCL10P02778 98 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 CLTBP09497 229 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 CDK11BP21127 795 aaKnown RBP18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 COPB1P53618 953 aaKnown RBP18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 CLDN10P78369 228 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 MAN2A1Q16706 1144 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 MIIPQ5JXC2 388 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 UBXN11Q5T124 520 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 CEP135Q66GS9 1140 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 CBWD2Q8IUF1 395 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 ANKRD20A12PQ8NF67 263 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 TMC2Q8TDI7 906 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 ADPGKQ9BRR6 497 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 TUBGCP2Q9BSJ2 902 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 HIPK3Q9H422 1215 aa18.35■□□□□ 0.53
SCAMP3-207ENST00000480219 ZNF233A6NK53 670 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 KIAA0355O15063 1070 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 GHRP10912 638 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 GRM5P41594 1212 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 CYP24A1Q07973 514 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 BFSP1Q12934 665 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 PAK2Q13177 524 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 NR1I3Q14994 352 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 CCDC40Q4G0X9 1142 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 HSP90AA4PQ58FG1 418 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 BRSK2Q8IWQ3 736 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 SLC35C1Q96A29 364 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 SAAL1Q96ER3 474 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 TCHPQ9BT92 498 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 WNT8AQ9H1J5 351 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 TMX1Q9H3N1 280 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 RTN4Q9NQC3 1192 aaKnown RBP18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 PIN4Q9Y237 131 aaKnown RBP18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 ATP11BQ9Y2G3 1177 aa18.34■□□□□ 0.53
SCAMP3-207ENST00000480219 LGALS16A8MUM7 142 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 PMM2O15305 246 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 CLTAP09496 248 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 CD52P31358 61 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 MTIF2P46199 727 aaKnown RBP18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 PSMD6Q15008 389 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 PLEKHG4Q58EX7 1191 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 ZBTB41Q5SVQ8 909 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 C1orf220Q5T0J3 134 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 PLEKHO2Q8TD55 490 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 PARD3BQ8TEW8 1205 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 MRFAP1L1Q96HT8 127 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 FAM213AQ9BRX8 229 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 INTS13Q9NVM9 706 aa18.33■□□□□ 0.52
SCAMP3-207ENST00000480219 UMODL1Q5DID0 1318 aa18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 GOLGA8IPA6NC78 632 aa18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 GOLGA8JA6NMD2 632 aa18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 CBFA2T2O43439 604 aa18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 NBNO60934 754 aa18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 ZNF623O75123 536 aa18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 SERPINC1P01008 464 aa18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 RFC2P35250 354 aa18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 UBASH3AP57075 661 aa18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 TMEM132AQ24JP5 1023 aa18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 VWA3BQ502W6 1294 aa18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 ZBTB33Q86T24 672 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms