RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TARS2Q9BW92 718 aaKnown RBP11.95□□□□□ -0.5
VTI1A-204ENST00000480057 CFHR5Q9BXR6 569 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 L2HGDHQ9H9P8 463 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 FLRT1Q9NZU1 646 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 DNAI1Q9UI46 699 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 DNAJC12Q9UKB3 198 aa11.95□□□□□ -0.5
VTI1A-204ENST00000480057 NRCAMQ92823 1304 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 F8VZ95 297 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 CLDN3O15551 220 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 KPNA6O60684 536 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 PROZP22891 400 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 SOX5P35711 763 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 NKX3-2P78367 333 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 KIF5AQ12840 1032 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 PPFIA1Q13136 1202 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 PCBP1Q15365 356 aaKnown RBP eCLIP11.94□□□□□ -0.5
VTI1A-204ENST00000480057 GRIK4Q16099 956 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 SLC18A3Q16572 532 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 KYAT1Q16773 422 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 TSHZ1Q6ZSZ6 1077 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 ENOSF1Q7L5Y1 443 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 TLK2Q86UE8 772 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 ZNF410Q86VK4 478 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 VPS36Q86VN1 386 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 RHPN2Q8IUC4 686 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 LRRC71Q8N4P6 559 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 ZNF592Q92610 1267 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 MAP7D2Q96T17 732 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 ACO2Q99798 780 aaKnown RBP11.94□□□□□ -0.5
VTI1A-204ENST00000480057 MSTO1Q9BUK6 570 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 KATNAL1Q9BW62 490 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 IFIH1Q9BYX4 1025 aaKnown RBP11.94□□□□□ -0.5
VTI1A-204ENST00000480057 LZTFL1Q9NQ48 299 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 TNFSF13BQ9Y275 285 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 PCDHA13Q9Y5I0 950 aa11.94□□□□□ -0.5
VTI1A-204ENST00000480057 CASP8AP2Q9UKL3 1982 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 HAS3O00219 553 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 OGTO15294 1046 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 DYNC1LI2O43237 492 aaPredicted RBP11.93□□□□□ -0.5
VTI1A-204ENST00000480057 ADCY6O43306 1168 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 ZEB2O60315 1214 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 PLEKP08567 350 aaPredicted RBP11.93□□□□□ -0.5
VTI1A-204ENST00000480057 ZNF286BP0CG31 522 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 SRGAP2CP0DJJ0 459 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 AKR1A1P14550 325 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 CYP2B6P20813 491 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 MBTD1Q05BQ5 628 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 DRAP1Q14919 205 aaPredicted RBP11.93□□□□□ -0.5
VTI1A-204ENST00000480057 ZACNQ401N2 412 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 MFSD14CQ5VZR4 134 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 PHLDB3Q6NSJ2 640 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 CRELD2Q6UXH1 353 aaPredicted RBP11.93□□□□□ -0.5
VTI1A-204ENST00000480057 SRGAP1Q7Z6B7 1085 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 BRSK2Q8IWQ3 736 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 METTL13Q8N6R0 699 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 FBXL13Q8NEE6 735 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 ZSWIM2Q8NEG5 633 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 TRAPPC12Q8WVT3 735 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 CCDC127Q96BQ5 260 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 FNBP1Q96RU3 617 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 CGRRF1Q99675 332 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 HAPLN2Q9GZV7 340 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 AP5M1Q9H0R1 490 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 PTPRHQ9HD43 1115 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 RBAKQ9NYW8 714 aaPredicted RBP11.93□□□□□ -0.5
VTI1A-204ENST00000480057 SRCAPQ6ZRS2 3230 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 DOCK3Q8IZD9 2030 aa11.93□□□□□ -0.5
VTI1A-204ENST00000480057 CNTNAP2Q9UHC6 1331 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 SMIM35A0A1B0GVV1 85 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 BTNL10A8MVZ5 291 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 ABLIM1O14639 778 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 RIOK3O14730 519 aaKnown RBP11.92□□□□□ -0.5
VTI1A-204ENST00000480057 ZNF263O14978 683 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 DUSP11O75319 330 aaKnown RBP11.92□□□□□ -0.5
VTI1A-204ENST00000480057 CYP2C19P33261 490 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 MAGEA1P43355 309 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 CLCN3P51790 818 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 MFAP3P55082 362 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 NLRP11P59045 1033 aaKnown RBP11.92□□□□□ -0.5
VTI1A-204ENST00000480057 LACTBP83111 547 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-204ENST00000480057 APBA1Q02410 837 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 PTK2Q05397 1052 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 PRPF4BQ13523 1007 aaKnown RBP11.92□□□□□ -0.5
VTI1A-204ENST00000480057 BMS1Q14692 1282 aaKnown RBP11.92□□□□□ -0.5
VTI1A-204ENST00000480057 KIF22Q14807 665 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 CCL14Q16627 93 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 ZNF569Q5MCW4 686 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 CCDC122Q5T0U0 273 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 MPZL3Q6UWV2 235 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 SV2AQ7L0J3 742 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 RNF10Q8N5U6 811 aaKnown RBP11.92□□□□□ -0.5
VTI1A-204ENST00000480057 NLRP4Q96MN2 994 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 NT5C1BQ96P26 610 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 GPR88Q9GZN0 384 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 RAB20Q9NX57 234 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 AJAP1Q9UKB5 411 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-204ENST00000480057 INTUQ9ULD6 942 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 NENFQ9UMX5 172 aa11.92□□□□□ -0.5
VTI1A-204ENST00000480057 MBLAC1A4D2B0 266 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-204ENST00000480057 CTAGE9A4FU28 777 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms