RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 CEBPZQ03701 1054 aaKnown RBP11.6□□□□□ -0.55
SP140-210ENST00000479539 DSC1Q08554 894 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 KARSQ15046 597 aaKnown RBP11.6□□□□□ -0.55
SP140-210ENST00000479539 PUS10Q3MIT2 529 aaKnown RBP11.6□□□□□ -0.55
SP140-210ENST00000479539 EEF1DP3Q658K8 133 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 USP49Q70CQ1 688 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 TAS1R3Q7RTX0 852 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 TMC7Q7Z402 723 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 DDX53Q86TM3 631 aaKnown RBP11.6□□□□□ -0.55
SP140-210ENST00000479539 RBM23Q86U06 439 aaKnown RBP11.6□□□□□ -0.55
SP140-210ENST00000479539 COLGALT2Q8IYK4 626 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 MRPL43Q8N983 215 aaKnown RBP11.6□□□□□ -0.55
SP140-210ENST00000479539 BCL7CQ8WUZ0 217 aaPredicted RBP11.6□□□□□ -0.55
SP140-210ENST00000479539 RAD54LQ92698 747 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 EPSTI1Q96J88 318 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 ZFP42Q96MM3 310 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 UHRF1Q96T88 793 aaPredicted RBP11.6□□□□□ -0.55
SP140-210ENST00000479539 APOL6Q9BWW8 343 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 GBP3Q9H0R5 595 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 TLE6Q9H808 572 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 PTPRHQ9HD43 1115 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 KMT5AQ9NQR1 393 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 STK39Q9UEW8 545 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 TNFSF13BQ9Y275 285 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 FAN1Q9Y2M0 1017 aa11.6□□□□□ -0.55
SP140-210ENST00000479539 NPHP3-ACAD11A0A0J9YXS1 232 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 FSD2A1L4K1 749 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 GRXCR2A6NFK2 248 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 HIDE1A8MVS5 230 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 NRP1O14786 923 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 PER2O15055 1255 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 SLC16A4O15374 487 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 LINC01565O15544 149 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 HSP90AA1P07900 732 aaKnown RBP11.59□□□□□ -0.55
SP140-210ENST00000479539 SCNN1GP51170 649 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 SMTNP53814 917 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 DLX2Q07687 328 aaPredicted RBP11.59□□□□□ -0.55
SP140-210ENST00000479539 RAD51AP2Q09MP3 1159 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 MCM6Q14566 821 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 DUSP6Q16828 381 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 TMEM132AQ24JP5 1023 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 DCAF4L1Q3SXM0 396 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 SPECC1Q5M775 1068 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 ATF7IP2Q5U623 682 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 PLPP4Q5VZY2 271 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 VPS52Q8N1B4 723 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 LINC00301Q8NCQ3 95 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 TMEM161BQ8NDZ6 487 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 MSLNLQ96KJ4 702 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 CLIC6Q96NY7 704 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 DCBLD2Q96PD2 775 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 FAM193BQ96PV7 902 aaPredicted RBP11.59□□□□□ -0.55
SP140-210ENST00000479539 ACO2Q99798 780 aaKnown RBP11.59□□□□□ -0.55
SP140-210ENST00000479539 ADPGKQ9BRR6 497 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 ENTPD7Q9NQZ7 604 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 CLEC1BQ9P126 229 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 LARSQ9P2J5 1176 aaKnown RBP11.59□□□□□ -0.55
SP140-210ENST00000479539 PARP2Q9UGN5 583 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 ODF2LQ9ULJ1 636 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 IRAK3Q9Y616 596 aa11.59□□□□□ -0.55
SP140-210ENST00000479539 MUC3AQ02505 3323 aa11.58□□□□□ -0.55
SP140-210ENST00000479539 C2orf71A6NGG8 1288 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 TBX10O75333 385 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 BRD1O95696 1058 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 CXCL14O95715 111 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 GLP2RO95838 553 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 EFEMP2O95967 443 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 ZSCAN22P10073 491 aaPredicted RBP11.58□□□□□ -0.56
SP140-210ENST00000479539 CTSAP10619 480 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 MAPTP10636 758 aaKnown RBP11.58□□□□□ -0.56
SP140-210ENST00000479539 PROZP22891 400 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 ZNF131P52739 623 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 KCNC3Q14003 757 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 GIT2Q14161 759 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 SMC1AQ14683 1233 aaKnown RBP11.58□□□□□ -0.56
SP140-210ENST00000479539 BMS1Q14692 1282 aaKnown RBP11.58□□□□□ -0.56
SP140-210ENST00000479539 PTCRAQ6ISU1 281 aaPredicted RBP11.58□□□□□ -0.56
SP140-210ENST00000479539 TMEM184AQ6ZMB5 413 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 EP400NLQ6ZTU2 488 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 APBB1IPQ7Z5R6 666 aaPredicted RBP11.58□□□□□ -0.56
SP140-210ENST00000479539 GPBP1Q86WP2 473 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 KRI1Q8N9T8 703 aaKnown RBP11.58□□□□□ -0.56
SP140-210ENST00000479539 VN1R2Q8NFZ6 395 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 RASSF8Q8NHQ8 419 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 LARP4BQ92615 738 aaKnown RBP11.58□□□□□ -0.56
SP140-210ENST00000479539 ZNF396Q96N95 335 aaPredicted RBP11.58□□□□□ -0.56
SP140-210ENST00000479539 REEP2Q9BRK0 252 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 TARS2Q9BW92 718 aaKnown RBP11.58□□□□□ -0.56
SP140-210ENST00000479539 VN1R3Q9BXE9 311 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 MRPL4Q9BYD3 311 aaKnown RBP11.58□□□□□ -0.56
SP140-210ENST00000479539 ZBP1Q9H171 429 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 SNTG2Q9NY99 539 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 KLK14Q9P0G3 267 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 CCDC39Q9UFE4 941 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 COL4A4P53420 1690 aaPredicted RBP11.58□□□□□ -0.56
SP140-210ENST00000479539 LOXHD1Q8IVV2 1947 aa11.58□□□□□ -0.56
SP140-210ENST00000479539 TNFRSF10AO00220 468 aa11.57□□□□□ -0.56
SP140-210ENST00000479539 ABLIM1O14639 778 aa11.57□□□□□ -0.56
SP140-210ENST00000479539 LILRB3O75022 631 aa11.57□□□□□ -0.56
SP140-210ENST00000479539 PPP6R2O75170 966 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms