RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 GLB1LQ6UWU2 654 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 KSR1Q8IVT5 923 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 EXOC8Q8IYI6 725 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 RNF168Q8IYW5 571 aaPredicted RBP7.42□□□□□ -1.22
VCP-205ENST00000479300 PDCD7Q8N8D1 485 aaKnown RBP7.42□□□□□ -1.22
VCP-205ENST00000479300 DAGLBQ8NCG7 672 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 NLRP7Q8WX94 980 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 SLC5A5Q92911 643 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 TBC1D32Q96NH3 1257 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 FDXACB1Q9BRP7 624 aaPredicted RBP7.42□□□□□ -1.22
VCP-205ENST00000479300 SLC24A3Q9HC58 644 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 WDR6Q9NNW5 1121 aaKnown RBP7.42□□□□□ -1.22
VCP-205ENST00000479300 FAM105AQ9NUU6 356 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 DACT1Q9NYF0 836 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 SEPT9Q9UHD8 586 aaPredicted RBP7.42□□□□□ -1.22
VCP-205ENST00000479300 DDX25Q9UHL0 483 aaKnown RBP7.42□□□□□ -1.22
VCP-205ENST00000479300 PATJQ8NI35 1801 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 CLUHO75153 1309 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 STK36Q9NRP7 1315 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 CCDC195A0A1B0GUA6 201 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 ANHXE9PGG2 379 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 C2CD2LO14523 706 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 NRP1O14786 923 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 INPPL1O15357 1258 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 CCNT1O60563 726 aaKnown RBP7.41□□□□□ -1.22
VCP-205ENST00000479300 PFKFB2O60825 505 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 TDP2O95551 362 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 SPATA31D3P0C874 917 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 PDIA4P13667 645 aaKnown RBP7.41□□□□□ -1.22
VCP-205ENST00000479300 TGM1P22735 817 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 HOXA11P31270 313 aaPredicted RBP7.41□□□□□ -1.22
VCP-205ENST00000479300 GBP2P32456 591 aaPredicted RBP7.41□□□□□ -1.22
VCP-205ENST00000479300 GIT2Q14161 759 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 INF2Q27J81 1249 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 MTERF2Q49AM1 385 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 XKR3Q5GH77 459 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 PPP1R15BQ5SWA1 713 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 KIAA0319Q5VV43 1072 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 TWF2Q6IBS0 349 aaKnown RBP7.41□□□□□ -1.22
VCP-205ENST00000479300 PHLDB3Q6NSJ2 640 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 B3GNT9Q6UX72 402 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 SPATA31D4Q6ZUB0 917 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 MRPL10Q7Z7H8 261 aaKnown RBP7.41□□□□□ -1.22
VCP-205ENST00000479300 NEK8Q86SG6 692 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 PPFIBP1Q86W92 1011 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 C1orf210Q8IVY1 113 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 PJA1Q8NG27 643 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 RUBCNQ92622 972 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 B3GALT6Q96L58 329 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 FAM20AQ96MK3 541 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 CCDC43Q96MW1 224 aaKnown RBP7.41□□□□□ -1.22
VCP-205ENST00000479300 RPS6KC1Q96S38 1066 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 RHOBTB2Q9BYZ6 727 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 GCOM2Q9BZD3 368 aaPredicted RBP7.41□□□□□ -1.22
VCP-205ENST00000479300 INO80BQ9C086 356 aaPredicted RBP7.41□□□□□ -1.22
VCP-205ENST00000479300 UNC45AQ9H3U1 944 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 MINDY3Q9H8M7 445 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 IFT122Q9HBG6 1241 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 ARHGEF3Q9NR81 526 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 CHST12Q9NRB3 414 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 ORC3Q9UBD5 711 aaPredicted RBP7.41□□□□□ -1.22
VCP-205ENST00000479300 KCNJ14Q9UNX9 436 aa7.41□□□□□ -1.22
VCP-205ENST00000479300 PIN4Q9Y237 131 aaKnown RBP7.41□□□□□ -1.22
VCP-205ENST00000479300 MTF2Q9Y483 593 aaPredicted RBP7.41□□□□□ -1.22
VCP-205ENST00000479300 CYP3A7-CYP3A51PA0A087WV96 503 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 SHISA7A6NL88 538 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 ZNF500O60304 480 aaPredicted RBP7.4□□□□□ -1.22
VCP-205ENST00000479300 KIF20AO95235 890 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 POMCP01189 267 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 SOD2P04179 222 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 SKIP12755 728 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 LAMP2P13473 410 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 CYP3A7P24462 503 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 MSNP26038 577 aaKnown RBP7.4□□□□□ -1.22
VCP-205ENST00000479300 KRT2P35908 639 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 NEK4P51957 841 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 ATXN1P54253 815 aaKnown RBP7.4□□□□□ -1.22
VCP-205ENST00000479300 AK2P54819 239 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 PSMC5P62195 406 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 RNASELQ05823 741 aaKnown RBP7.4□□□□□ -1.22
VCP-205ENST00000479300 SCRN1Q12765 414 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 GNL2Q13823 731 aaKnown RBP7.4□□□□□ -1.22
VCP-205ENST00000479300 BMS1Q14692 1282 aaKnown RBP7.4□□□□□ -1.22
VCP-205ENST00000479300 SAFBQ15424 915 aaKnown RBP eCLIP7.4□□□□□ -1.22
VCP-205ENST00000479300 TAF3Q5VWG9 929 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 OTUD6AQ7L8S5 288 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 SLFN12Q8IYM2 578 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 TMEM87AQ8NBN3 555 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 SMG8Q8ND04 991 aaKnown RBP7.4□□□□□ -1.22
VCP-205ENST00000479300 SMG7Q92540 1137 aaKnown RBP7.4□□□□□ -1.22
VCP-205ENST00000479300 PHF20Q9BVI0 1012 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 HERC2P3Q9BVR0 1158 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 EMILIN2Q9BXX0 1053 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 NIFKQ9BYG3 293 aaKnown RBP7.4□□□□□ -1.22
VCP-205ENST00000479300 GTPBP4Q9BZE4 634 aaKnown RBP7.4□□□□□ -1.22
VCP-205ENST00000479300 NT5C3AQ9H0P0 336 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 RXFP1Q9HBX9 757 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 SLC2A4RGQ9NR83 387 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 AGPAT5Q9NUQ2 364 aa7.4□□□□□ -1.22
VCP-205ENST00000479300 MIOSQ9NXC5 875 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms