RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ME3Q16798 604 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 TMEM132AQ24JP5 1023 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 FUT10Q6P4F1 479 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 SLC27A1Q6PCB7 646 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 MAEAQ7L5Y9 396 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 TAS1R1Q7RTX1 841 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 CDR2LQ86X02 465 aaPredicted RBP14.7□□□□□ -0.06
VCL-205ENST00000478896 DIS3L2Q8IYB7 885 aaKnown RBP14.7□□□□□ -0.06
VCL-205ENST00000478896 CMASQ8NFW8 434 aaPredicted RBP14.7□□□□□ -0.06
VCL-205ENST00000478896 PIGOQ8TEQ8 1089 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 TNFRSF25Q93038 417 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 GTF3C6Q969F1 213 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 KCNK12Q9HB15 430 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 PIDD1Q9HB75 910 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 MIOSQ9NXC5 875 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 MTCL1Q9Y4B5 1905 aaKnown RBP14.7□□□□□ -0.06
VCL-205ENST00000478896 TRIOO75962 3097 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 CLUHO75153 1309 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 BTBD18B2RXH4 712 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 F8W810 466 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 B4GALT5O43286 388 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 LARGE1O95461 756 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 RFX1P22670 979 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 ARL2P36404 184 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 CLCN5P51795 746 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 GRIK3Q13003 919 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 AMHR2Q16671 573 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 CWF19L1Q69YN2 538 aaKnown RBP14.69□□□□□ -0.06
VCL-205ENST00000478896 PALB2Q86YC2 1186 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 RNF168Q8IYW5 571 aaPredicted RBP14.69□□□□□ -0.06
VCL-205ENST00000478896 SMG7Q92540 1137 aaKnown RBP14.69□□□□□ -0.06
VCL-205ENST00000478896 HSD17B14Q9BPX1 270 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 NFKBIZQ9BYH8 718 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 WDR6Q9NNW5 1121 aaKnown RBP14.69□□□□□ -0.06
VCL-205ENST00000478896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.69□□□□□ -0.06
VCL-205ENST00000478896 KLK14Q9P0G3 267 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 IGSF9Q9P2J2 1179 aa14.69□□□□□ -0.06
VCL-205ENST00000478896 RFPL2O75678 378 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 SPATA31D3P0C874 917 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 ATP2B1P20020 1258 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 USP41Q3LFD5 358 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 KIAA0319Q5VV43 1072 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 CYP26C1Q6V0L0 522 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 SPATA31D4Q6ZUB0 917 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 ZBTB8OSQ8IWT0 167 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 SIX5Q8N196 739 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 NSUN7Q8NE18 718 aaKnown RBP14.68□□□□□ -0.06
VCL-205ENST00000478896 RIN2Q8WYP3 895 aaPredicted RBP14.68□□□□□ -0.06
VCL-205ENST00000478896 B3GALT6Q96L58 329 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 RXFP1Q9HBX9 757 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 GPRC5CQ9NQ84 441 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 PRMT7Q9NVM4 692 aaPredicted RBP14.68□□□□□ -0.06
VCL-205ENST00000478896 ADAM28Q9UKQ2 775 aa14.68□□□□□ -0.06
VCL-205ENST00000478896 A0A087WWV3 80 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 STK25O00506 426 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 WNT7AO00755 349 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 TADA2AO75478 443 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 CFHP08603 1231 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 MCM7P33993 719 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 CREMQ03060 361 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 GET4Q7L5D6 327 aaPredicted RBP14.67□□□□□ -0.06
VCL-205ENST00000478896 MCPH1Q8NEM0 835 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 HASPINQ8TF76 798 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 RABGGTAQ92696 567 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 PRIMPOLQ96LW4 560 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 GPR62Q9BZJ7 368 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 PLEKHA4Q9H4M7 779 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 ZMYM2Q9UBW7 1377 aa14.67□□□□□ -0.06
VCL-205ENST00000478896 SF3B1O75533 1304 aaKnown RBP eCLIP14.66□□□□□ -0.061e-6■■■■■ 40.8
VCL-205ENST00000478896 A0A1B0GUA9 196 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 PROB1E7EW31 1015 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 TGM5O43548 720 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 NARSO43776 548 aaKnown RBP14.66□□□□□ -0.06
VCL-205ENST00000478896 JAK2O60674 1132 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 N4BP1O75113 896 aaKnown RBP14.66□□□□□ -0.06
VCL-205ENST00000478896 RPL17P18621 184 aaKnown RBP14.66□□□□□ -0.06
VCL-205ENST00000478896 LIG1P18858 919 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 AOC1P19801 751 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 HSP90AA2PQ14568 343 aaPredicted RBP14.66□□□□□ -0.06
VCL-205ENST00000478896 SAFBQ15424 915 aaKnown RBP eCLIP14.66□□□□□ -0.06
VCL-205ENST00000478896 CEP57Q86XR8 500 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 GSTCDQ8NEC7 633 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 HDAC7Q8WUI4 952 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 RSAD2Q8WXG1 361 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 MTMR9Q96QG7 549 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 RTP3Q9BQQ7 232 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 ADPGKQ9BRR6 497 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 TUFT1Q9NNX1 390 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 CHST7Q9NS84 486 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 ZDHHC7Q9NXF8 308 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 CACNG4Q9UBN1 327 aa14.66□□□□□ -0.06
VCL-205ENST00000478896 CASTOR2A6NHX0 329 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 N4BP3O15049 544 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 EFEMP2O95967 443 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 XRCC6P12956 609 aaKnown RBP eCLIP14.65□□□□□ -0.062e-6■□□□□ 9.4
VCL-205ENST00000478896 NBL1P41271 181 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 PPP4R3CPQ6ZMV5 832 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 ASCL5Q7RTU5 278 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 CATSPER3Q86XQ3 398 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 ERMNQ8TAM6 284 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms