RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 ERCC5P28715 1186 aaPredicted RBP12.81□□□□□ -0.36
PDCD11-204ENST00000478543 EFNA5P52803 228 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 MBTD1Q05BQ5 628 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 TPD52L1Q16890 204 aaPredicted RBP12.81□□□□□ -0.36
PDCD11-204ENST00000478543 TMEM132AQ24JP5 1023 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 TRIM71Q2Q1W2 868 aaKnown RBP12.81□□□□□ -0.36
PDCD11-204ENST00000478543 ANKRD40Q6AI12 368 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 CENPPQ6IPU0 288 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 MAP4K3Q8IVH8 894 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 DHX40Q8IX18 779 aaKnown RBP12.81□□□□□ -0.36
PDCD11-204ENST00000478543 BPIFA3Q9BQP9 254 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 SEZ6LQ9BYH1 1024 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 GCOM2Q9BZD3 368 aaPredicted RBP12.81□□□□□ -0.36
PDCD11-204ENST00000478543 CCDC113Q9H0I3 377 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 KCTD10Q9H3F6 313 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 TMEM134Q9H6X4 195 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 EXOC7Q9UPT5 735 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 DCHS1Q96JQ0 3298 aa12.81□□□□□ -0.36
PDCD11-204ENST00000478543 BICDL2A1A5D9 508 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 LCHNA4D1U4 455 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 BECN2A8MW95 431 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 ANKRD63C9JTQ0 380 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 CLIC2O15247 247 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 TGFB1I1O43294 461 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 CAVIN2O95810 425 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 CDC42EP1Q00587 391 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 MYL5Q02045 173 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 POU5F1BQ06416 359 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 IQCB1Q15051 598 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 MAPK6Q16659 721 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 CT47A1Q5JQC4 288 aaPredicted RBP12.8□□□□□ -0.36
PDCD11-204ENST00000478543 TTI2Q6NXR4 508 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 SRGAP1Q7Z6B7 1085 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 TMCO2Q7Z6W1 182 aaPredicted RBP12.8□□□□□ -0.36
PDCD11-204ENST00000478543 DEFB128Q7Z7B8 93 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 FBXL18Q96ME1 805 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 DUSP9Q99956 384 aaKnown RBP12.8□□□□□ -0.36
PDCD11-204ENST00000478543 NFKBIZQ9BYH8 718 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 CELF4Q9BZC1 486 aaKnown RBP12.8□□□□□ -0.36
PDCD11-204ENST00000478543 GBP3Q9H0R5 595 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 TMEM206Q9H813 350 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 TYW1Q9NV66 732 aaKnown RBP12.8□□□□□ -0.36
PDCD11-204ENST00000478543 TANC1Q9C0D5 1861 aa12.8□□□□□ -0.36
PDCD11-204ENST00000478543 TET1Q8NFU7 2136 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 TTLL13PA6NNM8 815 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 SMTNL1A8MU46 457 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 PDXKO00764 312 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 HNRNPDLO14979 420 aaKnown RBP12.79□□□□□ -0.36
PDCD11-204ENST00000478543 B4GALT5O43286 388 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 CALUO43852 315 aaPredicted RBP12.79□□□□□ -0.36
PDCD11-204ENST00000478543 CHRNA1P02708 482 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 RPLP2P05387 115 aaKnown RBP12.79□□□□□ -0.36
PDCD11-204ENST00000478543 IQCF3P0C7M6 154 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 DARSP14868 501 aaKnown RBP12.79□□□□□ -0.36
PDCD11-204ENST00000478543 IL9P15248 144 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 SCP2P22307 547 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 ABCD1P33897 745 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 LIG4P49917 911 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 CYP2J2P51589 502 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 CRYBB1P53674 252 aaPredicted RBP12.79□□□□□ -0.36
PDCD11-204ENST00000478543 LRRC63Q05C16 580 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 MGAT3Q09327 533 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 PRPF4BQ13523 1007 aaKnown RBP12.79□□□□□ -0.36
PDCD11-204ENST00000478543 NCAPHQ15003 741 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 ZCWPW2Q504Y3 356 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 HSP90AA4PQ58FG1 418 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 ZNF618Q5T7W0 954 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 SLC39A4Q6P5W5 647 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 HS2ST1Q7LGA3 356 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 CATSPER4Q7RTX7 472 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 RPAINQ86UA6 219 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
PDCD11-204ENST00000478543 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.79□□□□□ -0.36
PDCD11-204ENST00000478543 ENOX1Q8TC92 643 aaKnown RBP12.79□□□□□ -0.36
PDCD11-204ENST00000478543 GDPD5Q8WTR4 605 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 NOC3LQ8WTT2 800 aaKnown RBP12.79□□□□□ -0.36
PDCD11-204ENST00000478543 TMEM40Q8WWA1 233 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 EEF2KMTQ96G04 330 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 TARS2Q9BW92 718 aaKnown RBP12.79□□□□□ -0.36
PDCD11-204ENST00000478543 FZD8Q9H461 694 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 AGPAT3Q9NRZ7 376 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 PRMT7Q9NVM4 692 aaPredicted RBP12.79□□□□□ -0.36
PDCD11-204ENST00000478543 NFE2L3Q9Y4A8 694 aa12.79□□□□□ -0.36
PDCD11-204ENST00000478543 GOLGA6L19H0YKK7 550 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 ACKR2O00590 384 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 ERLIN2O94905 339 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 NR3C1P04150 777 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 HARSP12081 509 aaKnown RBP12.78□□□□□ -0.36
PDCD11-204ENST00000478543 CKBP12277 381 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 EIF4BP23588 611 aaKnown RBP12.78□□□□□ -0.36
PDCD11-204ENST00000478543 MATR3P43243 847 aaKnown RBP eCLIP12.78□□□□□ -0.36
PDCD11-204ENST00000478543 AMHR2Q16671 573 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 SPATA1Q5VX52 437 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 ARMCX5Q6P1M9 558 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 CDR2LQ86X02 465 aaPredicted RBP12.78□□□□□ -0.36
PDCD11-204ENST00000478543 CSGALNACT2Q8N6G5 542 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 CCDC155Q8N6L0 562 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 CPB2Q96IY4 423 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 ZBTB45Q96K62 511 aaPredicted RBP12.78□□□□□ -0.36
PDCD11-204ENST00000478543 CBWD1Q9BRT8 395 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms