RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 AMY2BP19961 511 aa2.83□□□□□ -1.96
CALD1-218ENST00000478075 SDHAP31040 664 aa2.83□□□□□ -1.96
CALD1-218ENST00000478075 SLC18B1Q6NT16 456 aa2.83□□□□□ -1.96
CALD1-218ENST00000478075 C16orf59Q7L2K0 433 aa2.83□□□□□ -1.96
CALD1-218ENST00000478075 DCP1BQ8IZD4 617 aaKnown RBP2.83□□□□□ -1.96
CALD1-218ENST00000478075 MSL3Q8N5Y2 521 aaKnown RBP2.83□□□□□ -1.96
CALD1-218ENST00000478075 POGKQ9P215 609 aa2.83□□□□□ -1.96
CALD1-218ENST00000478075 MAGEL2Q9UJ55 1249 aa2.83□□□□□ -1.96
CALD1-218ENST00000478075 PPP6CO00743 305 aa2.82□□□□□ -1.96
CALD1-218ENST00000478075 DLX3O60479 287 aa2.82□□□□□ -1.96
CALD1-218ENST00000478075 ALPLP05186 524 aa2.82□□□□□ -1.96
CALD1-218ENST00000478075 FOLR3P41439 243 aa2.82□□□□□ -1.96
CALD1-218ENST00000478075 ANTXR2P58335 489 aa2.82□□□□□ -1.96
CALD1-218ENST00000478075 RHDQ02161 417 aa2.82□□□□□ -1.96
CALD1-218ENST00000478075 NBPF8Q3BBV2 869 aa2.82□□□□□ -1.96
CALD1-218ENST00000478075 FAM153CQ494X1 144 aa2.82□□□□□ -1.96
CALD1-218ENST00000478075 FAM102AQ5T9C2 384 aaPredicted RBP2.82□□□□□ -1.96
CALD1-218ENST00000478075 HIST2H2BCQ6DN03 193 aa2.82□□□□□ -1.96
CALD1-218ENST00000478075 KCNT2Q6UVM3 1135 aa2.82□□□□□ -1.96
CALD1-218ENST00000478075 OSTM1Q86WC4 334 aa2.82□□□□□ -1.96
CALD1-218ENST00000478075 TMPRSS12Q86WS5 348 aa2.82□□□□□ -1.96
CALD1-218ENST00000478075 IGKV3-20P01619 116 aa2.81□□□□□ -1.96
CALD1-218ENST00000478075 PPP2R2AP63151 447 aa2.81□□□□□ -1.96
CALD1-218ENST00000478075 TRIP6Q15654 476 aaKnown RBP2.81□□□□□ -1.96
CALD1-218ENST00000478075 FAM47CQ5HY64 1035 aa2.81□□□□□ -1.96
CALD1-218ENST00000478075 BSPRYQ5W0U4 402 aa2.81□□□□□ -1.96
CALD1-218ENST00000478075 ZNF782Q6ZMW2 699 aaPredicted RBP2.81□□□□□ -1.96
CALD1-218ENST00000478075 MAPKAPK5Q8IW41 473 aa2.81□□□□□ -1.96
CALD1-218ENST00000478075 TMEM132CQ8N3T6 1108 aa2.81□□□□□ -1.96
CALD1-218ENST00000478075 LNX2Q8N448 690 aa2.81□□□□□ -1.96
CALD1-218ENST00000478075 PTCD3Q96EY7 689 aaKnown RBP2.81□□□□□ -1.96
CALD1-218ENST00000478075 SHDQ96IW2 340 aa2.81□□□□□ -1.96
CALD1-218ENST00000478075 REXO4Q9GZR2 422 aaKnown RBP2.81□□□□□ -1.96
CALD1-218ENST00000478075 NCOA5Q9HCD5 579 aaKnown RBP2.81□□□□□ -1.96
CALD1-218ENST00000478075 DNAI1Q9UI46 699 aa2.81□□□□□ -1.96
CALD1-218ENST00000478075 GCOM1H8Y6P7 765 aaPredicted RBP2.8□□□□□ -1.96
CALD1-218ENST00000478075 ZNF561-AS1K7EIQ3 104 aa2.8□□□□□ -1.96
CALD1-218ENST00000478075 CGAP01215 116 aa2.8□□□□□ -1.96
CALD1-218ENST00000478075 GRIA3P42263 894 aa2.8□□□□□ -1.96
CALD1-218ENST00000478075 BCAR1P56945 870 aa2.8□□□□□ -1.96
CALD1-218ENST00000478075 NANOS2P60321 138 aaKnown RBP2.8□□□□□ -1.96
CALD1-218ENST00000478075 RABEP1Q15276 862 aa2.8□□□□□ -1.96
CALD1-218ENST00000478075 AMIGO2Q86SJ2 522 aa2.8□□□□□ -1.96
CALD1-218ENST00000478075 TMEM87AQ8NBN3 555 aa2.8□□□□□ -1.96
CALD1-218ENST00000478075 CPLX3Q8WVH0 158 aa2.8□□□□□ -1.96
CALD1-218ENST00000478075 RPGRQ92834 1020 aaKnown RBP2.8□□□□□ -1.96
CALD1-218ENST00000478075 TRIM55Q9BYV6 548 aa2.8□□□□□ -1.96
CALD1-218ENST00000478075 SPRTNQ9H040 489 aaPredicted RBP2.8□□□□□ -1.96
CALD1-218ENST00000478075 AQP7O14520 342 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 TMEM191BP0C7N4 346 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 JAM2P57087 298 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 KRTAP13-3Q3SY46 172 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 ZNF394Q53GI3 561 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 BTNL9Q6UXG8 535 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 COLGALT2Q8IYK4 626 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 RASGRP4Q8TDF6 673 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 PIGOQ8TEQ8 1089 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 MTFR1LQ9H019 292 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 SLCO5A1Q9H2Y9 848 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 METTL5Q9NRN9 209 aaKnown RBP2.79□□□□□ -1.96
CALD1-218ENST00000478075 PADI4Q9UM07 663 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 GTF3C3Q9Y5Q9 886 aa2.79□□□□□ -1.96
CALD1-218ENST00000478075 TUBB4AP04350 444 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 HNRNPLP14866 589 aaKnown RBP eCLIP2.78□□□□□ -1.96
CALD1-218ENST00000478075 CASRP41180 1078 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 TFF2Q03403 129 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 SF3B4Q15427 424 aaKnown RBP eCLIP2.78□□□□□ -1.96
CALD1-218ENST00000478075 LEXMQ3ZCV2 418 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 LDLRAD1Q5T700 205 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 AGAP9Q5VTM2 703 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 KAZNQ674X7 775 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 KIAA0895LQ68EN5 471 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 C9orf47Q6ZRZ4 202 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 RHOT2Q8IXI1 618 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 ZFP28Q8NHY6 868 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 RNF31Q96EP0 1072 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 PRSS22Q9GZN4 317 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 AFG3L2Q9Y4W6 797 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 PCDHGB7Q9Y5F8 929 aa2.78□□□□□ -1.96
CALD1-218ENST00000478075 HIP1RO75146 1068 aa2.77□□□□□ -1.97
CALD1-218ENST00000478075 ALDH1A2O94788 518 aa2.77□□□□□ -1.97
CALD1-218ENST00000478075 GRIA2P42262 883 aa2.77□□□□□ -1.97
CALD1-218ENST00000478075 RACK1P63244 317 aaKnown RBP2.77□□□□□ -1.97
CALD1-218ENST00000478075 LACTBP83111 547 aaPredicted RBP2.77□□□□□ -1.97
CALD1-218ENST00000478075 PAK2Q13177 524 aa2.77□□□□□ -1.97
CALD1-218ENST00000478075 HSP90AA2PQ14568 343 aaPredicted RBP2.77□□□□□ -1.97
CALD1-218ENST00000478075 UBE3CQ15386 1083 aa2.77□□□□□ -1.97
CALD1-218ENST00000478075 ZNF326Q5BKZ1 582 aaKnown RBP2.77□□□□□ -1.97
CALD1-218ENST00000478075 UBAP2Q5T6F2 1119 aaKnown RBP2.77□□□□□ -1.97
CALD1-218ENST00000478075 LARP1BQ659C4 914 aaKnown RBP2.77□□□□□ -1.97
CALD1-218ENST00000478075 LVRNQ6Q4G3 990 aa2.77□□□□□ -1.97
CALD1-218ENST00000478075 MTDHQ86UE4 582 aaKnown RBP2.77□□□□□ -1.97
CALD1-218ENST00000478075 XYLT1Q86Y38 959 aa2.77□□□□□ -1.97
CALD1-218ENST00000478075 UNC5BQ8IZJ1 945 aa2.77□□□□□ -1.97
CALD1-218ENST00000478075 OR56A1Q8NGH5 318 aa2.77□□□□□ -1.97
CALD1-218ENST00000478075 DNASE2BQ8WZ79 361 aa2.77□□□□□ -1.97
CALD1-218ENST00000478075 TFAP2CQ92754 450 aa2.77□□□□□ -1.97
CALD1-218ENST00000478075 DDX41Q9UJV9 622 aaKnown RBP2.77□□□□□ -1.97
CALD1-218ENST00000478075 SCDO00767 359 aa2.76□□□□□ -1.97
CALD1-218ENST00000478075 MPPED1O15442 326 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms