RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 STRN3Q13033 797 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 PSMD2Q13200 908 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 CAVIN1Q6NZI2 390 aaKnown RBP12.57□□□□□ -0.4
CBWD3-206ENST00000478048 SLC17A8Q8NDX2 589 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 SCFD1Q8WVM8 642 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 PRIMPOLQ96LW4 560 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 ACO2Q99798 780 aaKnown RBP12.57□□□□□ -0.4
CBWD3-206ENST00000478048 ADAM2Q99965 735 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 GDF15Q99988 308 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 MAPK8IP1Q9UQF2 711 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 CNTNAP2Q9UHC6 1331 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 A0A1B0GUA9 196 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-206ENST00000478048 TISP43B9A030 160 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 ENPP3O14638 875 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 FGBP02675 491 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 PCBP1Q15365 356 aaKnown RBP eCLIP12.57□□□□□ -0.4
CBWD3-206ENST00000478048 KLHL40Q2TBA0 621 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 C9orf50Q5SZB4 431 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 L1TD1Q5T7N2 865 aaKnown RBP12.57□□□□□ -0.4
CBWD3-206ENST00000478048 EEF1DP3Q658K8 133 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 SLC39A4Q6P5W5 647 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.57□□□□□ -0.4
CBWD3-206ENST00000478048 MAP4K3Q8IVH8 894 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 NELFCDQ8IXH7 590 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 ZNF507Q8TCN5 953 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 APBB2Q92870 758 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 CCDC47Q96A33 483 aaKnown RBP12.57□□□□□ -0.4
CBWD3-206ENST00000478048 ZBTB45Q96K62 511 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-206ENST00000478048 EIF2AQ9BY44 585 aaKnown RBP12.57□□□□□ -0.4
CBWD3-206ENST00000478048 PDZD7Q9H5P4 517 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 TTC3P53804 2025 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 ANKRD63C9JTQ0 380 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 EIF3DO15371 548 aaKnown RBP eCLIP12.56□□□□□ -0.4
CBWD3-206ENST00000478048 ZSCAN20P17040 1043 aaPredicted RBP12.56□□□□□ -0.4
CBWD3-206ENST00000478048 PTMSP20962 102 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 IBSPP21815 317 aaPredicted RBP12.56□□□□□ -0.4
CBWD3-206ENST00000478048 MORC3Q14149 939 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 IKBKEQ14164 716 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 TMEM132AQ24JP5 1023 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 UBXN11Q5T124 520 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 CCDC183Q5T5S1 534 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 ATF7IP2Q5U623 682 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 TWF2Q6IBS0 349 aaKnown RBP12.56□□□□□ -0.4
CBWD3-206ENST00000478048 PSRC1Q6PGN9 363 aaPredicted RBP12.56□□□□□ -0.4
CBWD3-206ENST00000478048 BICD1Q96G01 975 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 ACCSQ96QU6 501 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 PRR14Q9BWN1 585 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 FTHL17Q9BXU8 183 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 MRPL4Q9BYD3 311 aaKnown RBP12.56□□□□□ -0.4
CBWD3-206ENST00000478048 PRKD2Q9BZL6 878 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 CHST12Q9NRB3 414 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 RMND1Q9NWS8 449 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 CXXC1Q9P0U4 656 aaPredicted RBP12.56□□□□□ -0.4
CBWD3-206ENST00000478048 ZMYM2Q9UBW7 1377 aa12.56□□□□□ -0.4
CBWD3-206ENST00000478048 PTPRSQ13332 1948 aa12.55□□□□□ -0.4
CBWD3-206ENST00000478048 ABLIM1O14639 778 aa12.55□□□□□ -0.4
CBWD3-206ENST00000478048 HNRNPDLO14979 420 aaKnown RBP12.55□□□□□ -0.4
CBWD3-206ENST00000478048 AXLP30530 894 aa12.55□□□□□ -0.4
CBWD3-206ENST00000478048 DEFB103AP81534 67 aa12.55□□□□□ -0.4
CBWD3-206ENST00000478048 NCBP1Q09161 790 aaKnown RBP12.55□□□□□ -0.4
CBWD3-206ENST00000478048 ALCAMQ13740 583 aa12.55□□□□□ -0.4
CBWD3-206ENST00000478048 ZNF658Q5TYW1 1059 aaPredicted RBP12.55□□□□□ -0.4
CBWD3-206ENST00000478048 NOTUMQ6P988 496 aa12.55□□□□□ -0.4
CBWD3-206ENST00000478048 RBM43Q6ZSC3 357 aaKnown RBP12.55□□□□□ -0.4
CBWD3-206ENST00000478048 HVCN1Q96D96 273 aa12.55□□□□□ -0.4
CBWD3-206ENST00000478048 UBE2OQ9C0C9 1292 aaKnown RBP12.55□□□□□ -0.4
CBWD3-206ENST00000478048 HAPLN2Q9GZV7 340 aa12.55□□□□□ -0.4
CBWD3-206ENST00000478048 PTPRHQ9HD43 1115 aa12.55□□□□□ -0.4
CBWD3-206ENST00000478048 RGS18Q9NS28 235 aa12.55□□□□□ -0.4
CBWD3-206ENST00000478048 TNFSF13BQ9Y275 285 aa12.55□□□□□ -0.4
CBWD3-206ENST00000478048 ABHD14A-ACY1A0A1B0GW23 586 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 ZBBXA8MT70 800 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 C9IYK1 514 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 NPTXRO95502 500 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 PIGRP01833 764 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 ACTN1P12814 892 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 SCP2P22307 547 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 PROZP22891 400 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 PRCPP42785 496 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 LIG4P49917 911 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 WDR5P61964 334 aaKnown RBP12.54□□□□□ -0.4
CBWD3-206ENST00000478048 SHHQ15465 462 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 BMT2Q1RMZ1 405 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 STXBP4Q6ZWJ1 553 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 TMCO2Q7Z6W1 182 aaPredicted RBP12.54□□□□□ -0.4
CBWD3-206ENST00000478048 ZBTB33Q86T24 672 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 MYOCDQ8IZQ8 938 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 HERVK_113Q902F9 699 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 ZNF516Q92618 1163 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 ANKFY1Q9P2R3 1169 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 HES2Q9Y543 173 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 LAMA2P24043 3122 aaKnown RBP12.54□□□□□ -0.4
CBWD3-206ENST00000478048 LAMA3Q16787 3333 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 N4BP3O15049 544 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 TGFB1I1O43294 461 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 TOM1L1O75674 476 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 BAIAP3O94812 1187 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 HARSP12081 509 aaKnown RBP12.54□□□□□ -0.4
CBWD3-206ENST00000478048 ADSSP30520 456 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms