RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 ZC3H11AO75152 810 aaKnown RBP eCLIP15.57■□□□□ 0.08
PDE6D-204ENST00000477748 PDIA4P13667 645 aaKnown RBP15.57■□□□□ 0.08
PDE6D-204ENST00000477748 GUCY2CP25092 1073 aa15.57■□□□□ 0.08
PDE6D-204ENST00000477748 SLC12A3P55017 1021 aa15.57■□□□□ 0.08
PDE6D-204ENST00000477748 BCAR1P56945 870 aa15.57■□□□□ 0.08
PDE6D-204ENST00000477748 RAD51AP2Q09MP3 1159 aa15.57■□□□□ 0.08
PDE6D-204ENST00000477748 MAPK7Q13164 816 aa15.57■□□□□ 0.08
PDE6D-204ENST00000477748 DMP1Q13316 513 aaPredicted RBP15.57■□□□□ 0.08
PDE6D-204ENST00000477748 SMC1AQ14683 1233 aaKnown RBP15.57■□□□□ 0.08
PDE6D-204ENST00000477748 KARSQ15046 597 aaKnown RBP15.57■□□□□ 0.08
PDE6D-204ENST00000477748 FOXD4L5Q5VV16 416 aaPredicted RBP15.57■□□□□ 0.08
PDE6D-204ENST00000477748 DAW1Q8N136 415 aa15.57■□□□□ 0.08
PDE6D-204ENST00000477748 FOXD4L4Q8WXT5 416 aaPredicted RBP15.57■□□□□ 0.08
PDE6D-204ENST00000477748 TMEM169Q96HH4 297 aa15.57■□□□□ 0.08
PDE6D-204ENST00000477748 FAM193BQ96PV7 902 aaPredicted RBP15.57■□□□□ 0.08
PDE6D-204ENST00000477748 CCSER1Q9C0I3 900 aa15.57■□□□□ 0.08
PDE6D-204ENST00000477748 CCDC113Q9H0I3 377 aa15.57■□□□□ 0.08
PDE6D-204ENST00000477748 GBP3Q9H0R5 595 aa15.57■□□□□ 0.08
PDE6D-204ENST00000477748 NXF3Q9H4D5 531 aaKnown RBP15.57■□□□□ 0.08
PDE6D-204ENST00000477748 NRDE2Q9H7Z3 1164 aa15.57■□□□□ 0.08
PDE6D-204ENST00000477748 KANSL3Q9P2N6 904 aa15.57■□□□□ 0.08
PDE6D-204ENST00000477748 FBXO2Q9UK22 296 aaPredicted RBP15.57■□□□□ 0.08
PDE6D-204ENST00000477748 USP15Q9Y4E8 981 aaPredicted RBP15.57■□□□□ 0.08
PDE6D-204ENST00000477748 SRPRBQ9Y5M8 271 aaKnown RBP15.57■□□□□ 0.08
PDE6D-204ENST00000477748 TDRD15B5MCY1 1934 aaKnown RBP15.56■□□□□ 0.08
PDE6D-204ENST00000477748 TTLL13PA6NNM8 815 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 SFI1A8K8P3 1242 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 NT5C1B-RDH14C9J2C7 533 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 POMCP01189 267 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 PLCG1P19174 1290 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 NPTX2P47972 431 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 AFF1P51825 1210 aaKnown RBP15.56■□□□□ 0.08
PDE6D-204ENST00000477748 DHX8Q14562 1220 aaKnown RBP15.56■□□□□ 0.08
PDE6D-204ENST00000477748 SPECC1Q5M775 1068 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 TMC7Q7Z402 723 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 VN1R2Q8NFZ6 395 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 ZNF396Q96N95 335 aaPredicted RBP15.56■□□□□ 0.08
PDE6D-204ENST00000477748 GAD1Q99259 594 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 ADPGKQ9BRR6 497 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 PDZD7Q9H5P4 517 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 C17orf75Q9HAS0 396 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 KMT5AQ9NQR1 393 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 KCND2Q9NZV8 630 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 STK39Q9UEW8 545 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 USP20Q9Y2K6 914 aa15.56■□□□□ 0.08
PDE6D-204ENST00000477748 PHLPP2Q6ZVD8 1323 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 HOXB8P17481 243 aaPredicted RBP15.55■□□□□ 0.08
PDE6D-204ENST00000477748 AKAP5P24588 427 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 MLH1P40692 756 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 KCNC3Q14003 757 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 MCM6Q14566 821 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 SLC39A14Q15043 492 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 STK38Q15208 465 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 HERC4Q5GLZ8 1057 aaPredicted RBP15.55■□□□□ 0.08
PDE6D-204ENST00000477748 USP49Q70CQ1 688 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 GPBP1Q86WP2 473 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 ZNF280BQ86YH2 543 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 MRPL43Q8N983 215 aaKnown RBP15.55■□□□□ 0.08
PDE6D-204ENST00000477748 SUSD6Q92537 303 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 RAD54LQ92698 747 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 EPSTI1Q96J88 318 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 CLIC6Q96NY7 704 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 PHF7Q9BWX1 381 aaPredicted RBP15.55■□□□□ 0.08
PDE6D-204ENST00000477748 TMEM134Q9H6X4 195 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 BLOC1S4Q9NUP1 217 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 DNAJB4Q9UDY4 337 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 CCDC39Q9UFE4 941 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 PARP2Q9UGN5 583 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 KCNG1Q9UIX4 513 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 GIT1Q9Y2X7 761 aa15.55■□□□□ 0.08
PDE6D-204ENST00000477748 RBM19Q9Y4C8 960 aaKnown RBP15.55■□□□□ 0.08
PDE6D-204ENST00000477748 NPHP3-ACAD11A0A0J9YXS1 232 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 ARL5CA6NH57 179 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 HIDE1A8MVS5 230 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 LOC730098B7Z3J9 87 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 SLC16A4O15374 487 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 DDHD2O94830 711 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 EDN1P05305 212 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 GALTP07902 379 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 ZSCAN22P10073 491 aaPredicted RBP15.54■□□□□ 0.08
PDE6D-204ENST00000477748 PLS3P13797 630 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 TXLNAP40222 546 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 NASPP49321 788 aaPredicted RBP15.54■□□□□ 0.08
PDE6D-204ENST00000477748 GIT2Q14161 759 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 CBX2Q14781 532 aaPredicted RBP15.54■□□□□ 0.08
PDE6D-204ENST00000477748 ARSHQ5FYA8 562 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 NT5DC1Q5TFE4 455 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 ATF7IP2Q5U623 682 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 EEF1DP3Q658K8 133 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 ANKRD54Q6NXT1 300 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 RNF135Q8IUD6 432 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 KRI1Q8N9T8 703 aaKnown RBP15.54■□□□□ 0.08
PDE6D-204ENST00000477748 LRRC15Q8TF66 581 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 CASP10Q92851 521 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 SNX27Q96L92 541 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 ZFP42Q96MM3 310 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 ARHGAP28Q9P2N2 729 aa15.54■□□□□ 0.08
PDE6D-204ENST00000477748 TFIP11Q9UBB9 837 aaKnown RBP15.54■□□□□ 0.08
PDE6D-204ENST00000477748 MORC2Q9Y6X9 1032 aaPredicted RBP15.54■□□□□ 0.08
PDE6D-204ENST00000477748 C2orf71A6NGG8 1288 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms