RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 CARD9Q9H257 536 aa15.62■□□□□ 0.09
HDAC6-220ENST00000477528 IGSF9BQ9UPX0 1349 aa15.62■□□□□ 0.09
HDAC6-220ENST00000477528 PHKA2P46019 1235 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 STAT5BP51692 787 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 PRKCEQ02156 737 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 ZKSCAN8Q15776 578 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-220ENST00000477528 MIIPQ5JXC2 388 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 RNF25Q96BH1 459 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-220ENST00000477528 MMTAG2Q9BU76 263 aaKnown RBP15.61■□□□□ 0.09
HDAC6-220ENST00000477528 PNMA3Q9UL41 463 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 PHRF1Q9P1Y6 1649 aaKnown RBP15.61■□□□□ 0.09
HDAC6-220ENST00000477528 MSH2P43246 934 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 BASP1P80723 227 aaKnown RBP15.61■□□□□ 0.09
HDAC6-220ENST00000477528 DARS2Q6PI48 645 aaKnown RBP15.61■□□□□ 0.09
HDAC6-220ENST00000477528 TTC13Q8NBP0 860 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 TRIM51Q9BSJ1 452 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 APOL6Q9BWW8 343 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 ZWILCHQ9H900 591 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 TBX20Q9UMR3 447 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 LRRIQ3A6PVS8 624 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-220ENST00000477528 CYP3A4P08684 503 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 CNGA1P29973 690 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 DUOXA2Q1HG44 320 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 ZNF384Q8TF68 577 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 ARHGEF2Q92974 986 aaKnown RBP15.61■□□□□ 0.09
HDAC6-220ENST00000477528 MTMR8Q96EF0 704 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 ZIM3Q96PE6 472 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 DEFB129Q9H1M3 183 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 FAM198AQ9UFP1 575 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 CYP3A7-CYP3A51PA0A087WV96 503 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 PJA2O43164 708 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 CYP3A7P24462 503 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 GRM1Q13255 1194 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 EMC2Q15006 297 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 OTOP1Q7RTM1 612 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 FAM83AQ86UY5 434 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 NLRP14Q86W24 1093 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 C1orf54Q8WWF1 131 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 SNF8Q96H20 258 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 HSD3B7Q9H2F3 369 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 KCNQ5Q9NR82 932 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 PARVAQ9NVD7 372 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 STK38LQ9Y2H1 464 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 CD2APQ9Y5K6 639 aa15.61■□□□□ 0.09
HDAC6-220ENST00000477528 MEI1Q5TIA1 1274 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 LRRC55Q6ZSA7 311 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 CCDC125Q86Z20 511 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 RHPN2Q8IUC4 686 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 PDIK1LQ8N165 341 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 VPS52Q8N1B4 723 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 SLC30A5Q8TAD4 765 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 TMEM143Q96AN5 459 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 A0A0A6YYK5 440 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-220ENST00000477528 FOXN3O00409 490 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-220ENST00000477528 SH2D3CQ8N5H7 860 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 DNAJC19Q96DA6 116 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 SAYSD1Q9NPB0 183 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 MAD1L1Q9Y6D9 718 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 PPP1R37O75864 691 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 SLITRK3O94933 977 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 COMTP21964 271 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 COPB2P35606 906 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 ACOT2P49753 483 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 PPP2R5CQ13362 524 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 WDR59Q6PJI9 974 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 SLC5A5Q92911 643 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 PPP1R16BQ96T49 567 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 F8VZ95 297 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 VIL1P09327 827 aaKnown RBP15.6■□□□□ 0.09
HDAC6-220ENST00000477528 NPY5RQ15761 445 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 SPDYE2Q495Y8 402 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 KCNV1Q6PIU1 500 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 TADA2BQ86TJ2 420 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 GABPB2Q8TAK5 448 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-220ENST00000477528 DMGDHQ9UI17 866 aaKnown RBP15.6■□□□□ 0.09
HDAC6-220ENST00000477528 PCDHB2Q9Y5E7 798 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 RGPD5Q99666 1765 aa15.6■□□□□ 0.09
HDAC6-220ENST00000477528 C5P01031 1676 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 A0A0U1RQJ8 604 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 PCNX4Q63HM2 1172 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 ZNF662Q6ZS27 426 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 THAP2Q9H0W7 228 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 SNX25Q9H3E2 840 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 SCAF8Q9UPN6 1271 aaKnown RBP15.59■□□□□ 0.09
HDAC6-220ENST00000477528 ANKRD65E5RJM6 399 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 TAL1P17542 331 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-220ENST00000477528 CIITAP33076 1130 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 GMPSP49915 693 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-220ENST00000477528 GUCY1A3Q02108 690 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 TTLL4Q14679 1199 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 FOXR2Q6PJQ5 311 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 SYDE1Q6ZW31 735 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-220ENST00000477528 SLC16A10Q8TF71 515 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 PYROXD1Q8WU10 500 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 EIF3HO15372 352 aaKnown RBP eCLIP15.59■□□□□ 0.092e-6■■■□□ 16.8
HDAC6-220ENST00000477528 KRT14P02533 472 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 CLTAP09496 248 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 TAP1Q03518 808 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 KRT17Q04695 432 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 JAMLQ86YT9 394 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms