RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 KDM2BQ8NHM5 1336 aa4□□□□□ -1.77
XRN1-211ENST00000477237 STK10O94804 968 aaKnown RBP4□□□□□ -1.77
XRN1-211ENST00000477237 LY86O95711 162 aa4□□□□□ -1.77
XRN1-211ENST00000477237 BMP15O95972 392 aa4□□□□□ -1.77
XRN1-211ENST00000477237 ELANEP08246 267 aa4□□□□□ -1.77
XRN1-211ENST00000477237 MRPS35P82673 323 aaKnown RBP4□□□□□ -1.77
XRN1-211ENST00000477237 MXRA7P84157 204 aa4□□□□□ -1.77
XRN1-211ENST00000477237 DUSP2Q05923 314 aa4□□□□□ -1.77
XRN1-211ENST00000477237 EPHA7Q15375 998 aa4□□□□□ -1.77
XRN1-211ENST00000477237 SRSF7Q16629 238 aaKnown RBP eCLIP4□□□□□ -1.77
XRN1-211ENST00000477237 RUSC1-AS1Q66K80 236 aa4□□□□□ -1.77
XRN1-211ENST00000477237 C11orf87Q6NUJ2 197 aa4□□□□□ -1.77
XRN1-211ENST00000477237 CKAP2LQ8IYA6 745 aa4□□□□□ -1.77
XRN1-211ENST00000477237 MSL3Q8N5Y2 521 aaKnown RBP4□□□□□ -1.77
XRN1-211ENST00000477237 ACTRT2Q8TDY3 377 aa4□□□□□ -1.77
XRN1-211ENST00000477237 MYL10Q9BUA6 226 aa4□□□□□ -1.77
XRN1-211ENST00000477237 MTFR1LQ9H019 292 aa4□□□□□ -1.77
XRN1-211ENST00000477237 ZMYM3Q14202 1370 aa4□□□□□ -1.77
XRN1-211ENST00000477237 TCRBV16S1A1N1A0A5B0 115 aa3.99□□□□□ -1.77
XRN1-211ENST00000477237 PRPF6O94906 941 aaKnown RBP3.99□□□□□ -1.77
XRN1-211ENST00000477237 APOL3O95236 402 aa3.99□□□□□ -1.77
XRN1-211ENST00000477237 NPTXRO95502 500 aa3.99□□□□□ -1.77
XRN1-211ENST00000477237 CYP17A1P05093 508 aa3.99□□□□□ -1.77
XRN1-211ENST00000477237 MGAT1P26572 445 aa3.99□□□□□ -1.77
XRN1-211ENST00000477237 RASGRF1Q13972 1273 aa3.99□□□□□ -1.77
XRN1-211ENST00000477237 EZH2Q15910 746 aaKnown RBP3.99□□□□□ -1.77
XRN1-211ENST00000477237 EFCAB12Q6NXP0 572 aa3.99□□□□□ -1.77
XRN1-211ENST00000477237 FUBP1Q96AE4 644 aaKnown RBP3.99□□□□□ -1.77
XRN1-211ENST00000477237 HIST1H2AHQ96KK5 128 aa3.99□□□□□ -1.77
XRN1-211ENST00000477237 FCRL4Q96PJ5 515 aa3.99□□□□□ -1.77
XRN1-211ENST00000477237 HIST1H2AJQ99878 128 aa3.99□□□□□ -1.77
XRN1-211ENST00000477237 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.99□□□□□ -1.77
XRN1-211ENST00000477237 MANSC4A6NHS7 340 aaPredicted RBP3.98□□□□□ -1.77
XRN1-211ENST00000477237 TBKBP1A7MCY6 615 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 MAFGO15525 162 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 APBA1Q02410 837 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 FHL1Q13642 323 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 ARHGAP44Q17R89 818 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 AKNAD1Q5T1N1 836 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 KIAA1614Q5VZ46 1190 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 B3GNTL1Q67FW5 361 aaPredicted RBP3.98□□□□□ -1.77
XRN1-211ENST00000477237 KIAA1841Q6NSI8 718 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 PTF1AQ7RTS3 328 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 TAS1R1Q7RTX1 841 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 NME9Q86XW9 330 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 TMEM132CQ8N3T6 1108 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 SLC43A3Q8NBI5 491 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 ZNF48Q96MX3 618 aaPredicted RBP3.98□□□□□ -1.77
XRN1-211ENST00000477237 PCIF1Q9H4Z3 704 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 CASS4Q9NQ75 786 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 PODXL2Q9NZ53 605 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 ZNF580Q9UK33 172 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 MSRB2Q9Y3D2 182 aa3.98□□□□□ -1.77
XRN1-211ENST00000477237 B4E1Z4 1266 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 CLEC2LP0C7M8 214 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 ITPKBP27987 946 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 PTGER1P34995 402 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 SSBP2P81877 361 aaPredicted RBP3.97□□□□□ -1.77
XRN1-211ENST00000477237 TRIM61Q5EBN2 209 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 AGAP9Q5VTM2 703 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 ESRP1Q6NXG1 681 aaKnown RBP3.97□□□□□ -1.77
XRN1-211ENST00000477237 ZNF517Q6ZMY9 492 aaPredicted RBP3.97□□□□□ -1.77
XRN1-211ENST00000477237 FGD2Q7Z6J4 655 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 MAPKAPK5Q8IW41 473 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 KIAA1958Q8N8K9 716 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 TFAP2CQ92754 450 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 UROC1Q96N76 676 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 GMLQ99445 158 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 WACQ9BTA9 647 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 POFUT1Q9H488 388 aa3.97□□□□□ -1.77
XRN1-211ENST00000477237 B5MCH6 92 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 PCDH8O95206 1070 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 CHN2P52757 468 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 BMT2Q1RMZ1 405 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 SPDYE7PQ495Y7 208 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 TIGD7Q6NT04 549 aaPredicted RBP3.96□□□□□ -1.78
XRN1-211ENST00000477237 PHYKPLQ8IUZ5 450 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 C7orf31Q8N865 590 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 OR56A1Q8NGH5 318 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 RGMAQ96B86 450 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 FDXACB1Q9BRP7 624 aaPredicted RBP3.96□□□□□ -1.78
XRN1-211ENST00000477237 AIFM2Q9BRQ8 373 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 CCDC113Q9H0I3 377 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 KLHL11Q9NVR0 708 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 ATP11BQ9Y2G3 1177 aa3.96□□□□□ -1.78
XRN1-211ENST00000477237 ZNF804BA4D1E1 1349 aa3.95□□□□□ -1.78
XRN1-211ENST00000477237 DRGXA6NNA5 263 aa3.95□□□□□ -1.78
XRN1-211ENST00000477237 M0R2C6 588 aa3.95□□□□□ -1.78
XRN1-211ENST00000477237 NTN1O95631 604 aa3.95□□□□□ -1.78
XRN1-211ENST00000477237 ADCY1Q08828 1119 aa3.95□□□□□ -1.78
XRN1-211ENST00000477237 EIF2B5Q13144 721 aaKnown RBP3.95□□□□□ -1.78
XRN1-211ENST00000477237 MTX3Q5HYI7 312 aa3.95□□□□□ -1.78
XRN1-211ENST00000477237 HASPINQ8TF76 798 aa3.95□□□□□ -1.78
XRN1-211ENST00000477237 HEPHQ9BQS7 1158 aa3.95□□□□□ -1.78
XRN1-211ENST00000477237 HIRIP3Q9BW71 556 aaPredicted RBP3.95□□□□□ -1.78
XRN1-211ENST00000477237 TBCCD1Q9NVR7 557 aa3.95□□□□□ -1.78
XRN1-211ENST00000477237 LRP12Q9Y561 859 aa3.95□□□□□ -1.78
XRN1-211ENST00000477237 NOX1Q9Y5S8 564 aa3.95□□□□□ -1.78
XRN1-211ENST00000477237 MYPNQ86TC9 1320 aa3.95□□□□□ -1.78
XRN1-211ENST00000477237 KAT6AQ92794 2004 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms