RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 USP20Q9Y2K6 914 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 DNAH14Q0VDD8 3507 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 FAM186AA6NE01 2351 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 TRIP11Q15643 1979 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 TTLL13PA6NNM8 815 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 WNT7AO00755 349 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 ERLIN2O94905 339 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 NPTXRO95502 500 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 LMNAP02545 664 aaKnown RBP13.35□□□□□ -0.27
HDAC6-219ENST00000476625 LAMP2P13473 410 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 ARF4P18085 180 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-219ENST00000476625 CD72P21854 359 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 YWHABP31946 246 aaKnown RBP13.35□□□□□ -0.27
HDAC6-219ENST00000476625 CDC42EP1Q00587 391 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 FOXK2Q01167 660 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 MBTD1Q05BQ5 628 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 CAPSQ13938 189 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 FUT10Q6P4F1 479 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 ERMP1Q7Z2K6 904 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 GRASPQ7Z6J2 395 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-219ENST00000476625 DAGLBQ8NCG7 672 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 HINFPQ9BQA5 517 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 CHST7Q9NS84 486 aa13.35□□□□□ -0.27
HDAC6-219ENST00000476625 INO80B-WBP1J3KQ70 363 aa13.34□□□□□ -0.27
HDAC6-219ENST00000476625 GAS2O43903 313 aaKnown RBP13.34□□□□□ -0.27
HDAC6-219ENST00000476625 CCNT1O60563 726 aaKnown RBP13.34□□□□□ -0.27
HDAC6-219ENST00000476625 P4HBP07237 508 aaKnown RBP13.34□□□□□ -0.27
HDAC6-219ENST00000476625 EVCP57679 992 aa13.34□□□□□ -0.27
HDAC6-219ENST00000476625 GPC5P78333 572 aa13.34□□□□□ -0.27
HDAC6-219ENST00000476625 SPIRE1Q08AE8 756 aa13.34□□□□□ -0.27
HDAC6-219ENST00000476625 SNW1Q13573 536 aaKnown RBP13.34□□□□□ -0.27
HDAC6-219ENST00000476625 LILRA6Q6PI73 481 aa13.34□□□□□ -0.27
HDAC6-219ENST00000476625 DCLRE1AQ6PJP8 1040 aa13.34□□□□□ -0.27
HDAC6-219ENST00000476625 POTEHQ6S545 545 aa13.34□□□□□ -0.27
HDAC6-219ENST00000476625 PIK3AP1Q6ZUJ8 805 aa13.34□□□□□ -0.27
HDAC6-219ENST00000476625 MTRQ99707 1265 aa13.34□□□□□ -0.27
HDAC6-219ENST00000476625 CSRNP2Q9H175 543 aa13.34□□□□□ -0.27
HDAC6-219ENST00000476625 HCFC1R1Q9NWW0 138 aa13.34□□□□□ -0.27
HDAC6-219ENST00000476625 KANSL3Q9P2N6 904 aa13.34□□□□□ -0.27
HDAC6-219ENST00000476625 COL4A2P08572 1712 aa13.33□□□□□ -0.27
HDAC6-219ENST00000476625 CASTOR2A6NHX0 329 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 ANHXE9PGG2 379 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 CCL16O15467 120 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 DEXIO95424 95 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 EDN1P05305 212 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 GLRA2P23416 452 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 RFC5P40937 340 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 FOSBP53539 338 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 PTENP60484 403 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 MOXD1Q6UVY6 613 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 RUFY3Q7L099 469 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 MAEAQ7L5Y9 396 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 TPH2Q8IWU9 490 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 TRIM22Q8IYM9 498 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 FBXL16Q8N461 479 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 PJA1Q8NG27 643 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 ITFG1Q8TB96 612 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 ING5Q8WYH8 240 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 KXD1Q9BQD3 176 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 JPH2Q9BR39 696 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-219ENST00000476625 PHF20Q9BVI0 1012 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 PRKD2Q9BZL6 878 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 GPRC5CQ9NQ84 441 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 SIT1Q9Y3P8 196 aa13.33□□□□□ -0.28
HDAC6-219ENST00000476625 PTPRZ1P23471 2315 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-219ENST00000476625 ZMYND10O75800 440 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 KIF4AO95239 1232 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 FSHRP23945 695 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 EPHA7Q15375 998 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 NOTUMQ6P988 496 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 TSSK4Q6SA08 328 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 DGLUCYQ7Z3D6 616 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 KRT25Q7Z3Z0 450 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 NEK8Q86SG6 692 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 C1orf210Q8IVY1 113 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 C4orf19Q8IY42 314 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 RSPH1Q8WYR4 309 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 STAMQ92783 540 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 CLSTN3Q9BQT9 956 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 COLEC11Q9BWP8 271 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 PARP2Q9UGN5 583 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 ADAM28Q9UKQ2 775 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 TICRRQ7Z2Z1 1910 aa13.32□□□□□ -0.28
HDAC6-219ENST00000476625 CACNA1IQ9P0X4 2223 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 CCDC194A0A1B0GVG4 234 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-219ENST00000476625 PTGESO14684 152 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 CPLX1O14810 134 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 SLITRK3O94933 977 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 SCRN1Q12765 414 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 NR5A1Q13285 461 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 PHLDB3Q6NSJ2 640 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 CEP57Q86XR8 500 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 SUMF1Q8NBK3 374 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 PIGOQ8TEQ8 1089 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 TCP11Q8WWU5 503 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 C22orf23Q9BZE7 217 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 PLA2G2FQ9BZM2 168 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 TRIM6Q9C030 488 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-219ENST00000476625 POLR3FQ9H1D9 316 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms