RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 KCNH2Q12809 1159 aa11.29□□□□□ -0.6
ABCF1-205ENST00000475993 CCDC6Q16204 474 aa11.29□□□□□ -0.6
ABCF1-205ENST00000475993 OLFML2BQ68BL8 750 aa11.29□□□□□ -0.6
ABCF1-205ENST00000475993 LRRC74BQ6ZQY2 392 aa11.29□□□□□ -0.6
ABCF1-205ENST00000475993 C3orf67Q6ZVT6 689 aa11.29□□□□□ -0.6
ABCF1-205ENST00000475993 VPS36Q86VN1 386 aa11.29□□□□□ -0.6
ABCF1-205ENST00000475993 ZC3H3Q8IXZ2 948 aaKnown RBP11.29□□□□□ -0.6
ABCF1-205ENST00000475993 PRELID2Q8N945 189 aa11.29□□□□□ -0.6
ABCF1-205ENST00000475993 LZICQ8WZA0 190 aa11.29□□□□□ -0.6
ABCF1-205ENST00000475993 CDC42EP4Q9H3Q1 356 aaKnown RBP11.29□□□□□ -0.6
ABCF1-205ENST00000475993 SPO11Q9Y5K1 396 aa11.29□□□□□ -0.6
ABCF1-205ENST00000475993 ZNF142P52746 1687 aaPredicted RBP11.29□□□□□ -0.6
ABCF1-205ENST00000475993 LRP5O75197 1615 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 FOXO6A8MYZ6 492 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 CBX6O95503 412 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 TTLL1O95922 423 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 HSPA6P17066 643 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 SLC9A1P19634 815 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 YY1P25490 414 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 EPS15P42566 896 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 ZNF211Q13398 564 aaPredicted RBP11.28□□□□□ -0.6
ABCF1-205ENST00000475993 RCN1Q15293 331 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 ESCO1Q5FWF5 840 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 DUS1LQ6P1R4 473 aaKnown RBP11.28□□□□□ -0.6
ABCF1-205ENST00000475993 TTC27Q6P3X3 843 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 SLC35G2Q8TBE7 412 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 RFFLQ8WZ73 363 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 ALG3Q92685 438 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 RAD54LQ92698 747 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 ABHD8Q96I13 439 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 RIOK1Q9BRS2 568 aaKnown RBP11.28□□□□□ -0.6
ABCF1-205ENST00000475993 BRIP1Q9BX63 1249 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 NT5C3AQ9H0P0 336 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 TAOK3Q9H2K8 898 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 METTL14Q9HCE5 456 aaKnown RBP11.28□□□□□ -0.6
ABCF1-205ENST00000475993 DDX43Q9NXZ2 648 aaKnown RBP11.28□□□□□ -0.6
ABCF1-205ENST00000475993 LRP2BPQ9P2M1 347 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 FRMD4BQ9Y2L6 1034 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 ZNF711Q9Y462 761 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 COMMD3-BMI1R4GMX3 469 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 KCPQ6ZWJ8 1503 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 ADGRA3Q8IWK6 1321 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 ETS2P15036 469 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 CTNNA2P26232 953 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 SLC34A1Q06495 639 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 AP1B1Q10567 949 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 COASYQ13057 564 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 LETM2Q2VYF4 491 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 TMEM53Q6P2H8 277 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 ZNF449Q6P9G9 518 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 RFWD3Q6PCD5 774 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 PPP1R21Q6ZMI0 780 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 FAM47EQ6ZV65 393 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 CYFIP1Q7L576 1253 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 NELFCDQ8IXH7 590 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 OLIG1Q8TAK6 271 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 MIPEPQ99797 713 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 BARHL2Q9NY43 387 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 EFR3BQ9Y2G0 817 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 TBC1D30Q9Y2I9 924 aa11.28□□□□□ -0.6
ABCF1-205ENST00000475993 ANKRD63C9JTQ0 380 aa11.27□□□□□ -0.6
ABCF1-205ENST00000475993 TCEA3O75764 348 aa11.27□□□□□ -0.6
ABCF1-205ENST00000475993 HARSP12081 509 aaKnown RBP11.27□□□□□ -0.6
ABCF1-205ENST00000475993 JAM2P57087 298 aa11.27□□□□□ -0.6
ABCF1-205ENST00000475993 SH2D4BQ5SQS7 431 aa11.27□□□□□ -0.6
ABCF1-205ENST00000475993 STKLD1Q8NE28 680 aa11.27□□□□□ -0.6
ABCF1-205ENST00000475993 SLC30A5Q8TAD4 765 aa11.27□□□□□ -0.6
ABCF1-205ENST00000475993 U2AF1L4Q8WU68 220 aaKnown RBP11.27□□□□□ -0.6
ABCF1-205ENST00000475993 LRRC27Q9C0I9 530 aa11.27□□□□□ -0.6
ABCF1-205ENST00000475993 AAASQ9NRG9 546 aa11.27□□□□□ -0.6
ABCF1-205ENST00000475993 NKIRAS1Q9NYS0 192 aa11.27□□□□□ -0.6
ABCF1-205ENST00000475993 LARSQ9P2J5 1176 aaKnown RBP11.27□□□□□ -0.6
ABCF1-205ENST00000475993 RABL2AQ9UBK7 228 aaPredicted RBP11.27□□□□□ -0.6
ABCF1-205ENST00000475993 SNAP23O00161 211 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 HNRNPCL1O60812 293 aaKnown RBP11.27□□□□□ -0.61
ABCF1-205ENST00000475993 ACSL3O95573 720 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 LYNP07948 512 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 TMEM253P0C7T8 217 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 VARSP26640 1264 aaKnown RBP11.27□□□□□ -0.61
ABCF1-205ENST00000475993 PON1P27169 355 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 IGHMBP2P38935 993 aaKnown RBP11.27□□□□□ -0.61
ABCF1-205ENST00000475993 THOC7Q6I9Y2 204 aaKnown RBP11.27□□□□□ -0.61
ABCF1-205ENST00000475993 DSTYKQ6XUX3 929 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 ZNF554Q86TJ5 538 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 ZDHHC14Q8IZN3 488 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 ERMNQ8TAM6 284 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 DNAJC19Q96DA6 116 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 AGBL1Q96MI9 1066 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 MPHOSPH6Q99547 160 aaKnown RBP11.27□□□□□ -0.61
ABCF1-205ENST00000475993 TRPV5Q9NQA5 729 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 LGALS13Q9UHV8 139 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 SYNGAP1Q96PV0 1343 aa11.27□□□□□ -0.61
ABCF1-205ENST00000475993 CAPN9O14815 690 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 TBX10O75333 385 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 NAT2P11245 290 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 NFKBIAP25963 317 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 SH3BGRP55822 239 aaPredicted RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 IL9RQ01113 521 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 SLC35G1Q2M3R5 365 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms