RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDRT1-205ENST00000475944 ZMYM2Q9UBW7 1377 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 USP34Q70CQ2 3546 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 RFPL2O75678 378 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 EFEMP2O95967 443 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 NPR3P17342 541 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 ARL2P36404 184 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 CREMQ03060 361 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 GRIK3Q13003 919 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 NR5A1Q13285 461 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 AMHR2Q16671 573 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 USP41Q3LFD5 358 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 FUT10Q6P4F1 479 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 SLC27A1Q6PCB7 646 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 CCDC105Q8IYK2 499 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 NKD2Q969F2 451 aaPredicted RBP12.03□□□□□ -0.48
CDRT1-205ENST00000475944 NXPE3Q969Y0 559 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 HSD17B14Q9BPX1 270 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 NXF3Q9H4D5 531 aaKnown RBP12.03□□□□□ -0.48
CDRT1-205ENST00000475944 TTC12Q9H892 705 aaPredicted RBP12.03□□□□□ -0.48
CDRT1-205ENST00000475944 PIDD1Q9HB75 910 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 CHST7Q9NS84 486 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 MIOSQ9NXC5 875 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 ZDHHC7Q9NXF8 308 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 EPS15L1Q9UBC2 864 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 ADAM28Q9UKQ2 775 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 TPCN1Q9ULQ1 816 aa12.03□□□□□ -0.48
CDRT1-205ENST00000475944 TDRD15B5MCY1 1934 aaKnown RBP12.03□□□□□ -0.48
CDRT1-205ENST00000475944 FAM205CA6NFA0 338 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 PI15O43692 258 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 NEMFO60524 1076 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 N4BP1O75113 896 aaKnown RBP12.02□□□□□ -0.49
CDRT1-205ENST00000475944 PAPLNO95428 1278 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 CTDNEP1O95476 244 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 RFX1P22670 979 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 GLRA2P23416 452 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 RARRES1P49788 294 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 FRMD5Q7Z6J6 570 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 PALB2Q86YC2 1186 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 DTWD2Q8NBA8 298 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 ASAP3Q8TDY4 903 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 POLR3FQ9H1D9 316 aaPredicted RBP12.02□□□□□ -0.49
CDRT1-205ENST00000475944 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.02□□□□□ -0.49
CDRT1-205ENST00000475944 FNIP2Q9P278 1114 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 WNT16Q9UBV4 365 aa12.02□□□□□ -0.49
CDRT1-205ENST00000475944 CACNA1HO95180 2353 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 A0A1B0GUA9 196 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 LRRIQ4A6NIV6 560 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 F8W810 466 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 STK25O00506 426 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 B4GALT5O43286 388 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 TGM5O43548 720 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 NARSO43776 548 aaKnown RBP12.01□□□□□ -0.49
CDRT1-205ENST00000475944 USO1O60763 962 aaKnown RBP12.01□□□□□ -0.49
CDRT1-205ENST00000475944 DTNBO60941 627 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 TADA2AO75478 443 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 NPTXRO95502 500 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 CFHP08603 1231 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 SPATA31D3P0C874 917 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 MYBP10242 640 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 SRFP11831 508 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 XRCC6P12956 609 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDRT1-205ENST00000475944 AKAP5P24588 427 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 TXKP42681 527 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 ANAPC15P60006 121 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 ANGPT1Q15389 498 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 SPATA31D4Q6ZUB0 917 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 GLYCTKQ8IVS8 523 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 SLC44A3Q8N4M1 653 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 GSTCDQ8NEC7 633 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 PIGOQ8TEQ8 1089 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 RSAD2Q8WXG1 361 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 RIN2Q8WYP3 895 aaPredicted RBP12.01□□□□□ -0.49
CDRT1-205ENST00000475944 TNFRSF25Q93038 417 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 ZNF707Q96C28 371 aaPredicted RBP12.01□□□□□ -0.49
CDRT1-205ENST00000475944 PRIMPOLQ96LW4 560 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 MYADMQ96S97 322 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 GPR62Q9BZJ7 368 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 NT5C3AQ9H0P0 336 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 PARP2Q9UGN5 583 aa12.01□□□□□ -0.49
CDRT1-205ENST00000475944 SF3B1O75533 1304 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDRT1-205ENST00000475944 FOXK2Q01167 660 aa12□□□□□ -0.49
CDRT1-205ENST00000475944 TRIM29Q14134 588 aa12□□□□□ -0.49
CDRT1-205ENST00000475944 HSP90AA2PQ14568 343 aaPredicted RBP12□□□□□ -0.49
CDRT1-205ENST00000475944 LILRA6Q6PI73 481 aa12□□□□□ -0.49
CDRT1-205ENST00000475944 PPP4R3CPQ6ZMV5 832 aa12□□□□□ -0.49
CDRT1-205ENST00000475944 GET4Q7L5D6 327 aaPredicted RBP12□□□□□ -0.49
CDRT1-205ENST00000475944 CDR2LQ86X02 465 aaPredicted RBP12□□□□□ -0.49
CDRT1-205ENST00000475944 ZBTB8OSQ8IWT0 167 aa12□□□□□ -0.49
CDRT1-205ENST00000475944 MCPH1Q8NEM0 835 aa12□□□□□ -0.49
CDRT1-205ENST00000475944 B3GALT6Q96L58 329 aa12□□□□□ -0.49
CDRT1-205ENST00000475944 PRKD2Q9BZL6 878 aa12□□□□□ -0.49
CDRT1-205ENST00000475944 PRMT7Q9NVM4 692 aaPredicted RBP12□□□□□ -0.49
CDRT1-205ENST00000475944 KLK14Q9P0G3 267 aa12□□□□□ -0.49
CDRT1-205ENST00000475944 KRBA1A5PL33 1030 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 POTEMA6NI47 508 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 BTBD18B2RXH4 712 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 N4BP3O15049 544 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 ZMYND10O75800 440 aa11.99□□□□□ -0.49
CDRT1-205ENST00000475944 LAMP2P13473 410 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms