RNA–Protein interactions for RNA: ENST00000474880.5

ARPC1B-216, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-216ENST00000474880 STK17AQ9UEE5 414 aa12.2□□□□□ -0.46
ARPC1B-216ENST00000474880 PUF60Q9UHX1 559 aaKnown RBP12.2□□□□□ -0.46
ARPC1B-216ENST00000474880 CD207Q9UJ71 328 aa12.2□□□□□ -0.46
ARPC1B-216ENST00000474880 CFAP45Q9UL16 551 aa12.2□□□□□ -0.46
ARPC1B-216ENST00000474880 ODF2LQ9ULJ1 636 aa12.2□□□□□ -0.46
ARPC1B-216ENST00000474880 RBM19Q9Y4C8 960 aaKnown RBP12.2□□□□□ -0.46
ARPC1B-216ENST00000474880 IPPQ9Y573 584 aa12.2□□□□□ -0.46
ARPC1B-216ENST00000474880 MYH15Q9Y2K3 1946 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 HIDE1A8MVS5 230 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 H0YCG3 227 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 MBTPS2O43462 519 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 B4GALT3O60512 393 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 ZC3H11AO75152 810 aaKnown RBP eCLIP12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 TBCAO75347 108 aaKnown RBP12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 PLS3P13797 630 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 AFF1P51825 1210 aaKnown RBP12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 KRT17Q04695 432 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 MAPK7Q13164 816 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 SMAD4Q13485 552 aaKnown RBP12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 MCM6Q14566 821 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 SMAD2Q15796 467 aaKnown RBP12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 DUSP6Q16828 381 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 RRAGBQ5VZM2 374 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 PDE12Q6L8Q7 609 aaKnown RBP12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 TMEM173Q86WV6 379 aaPredicted RBP12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 GJD3Q8N144 294 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 KCNG4Q8TDN1 519 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 SPIRE2Q8WWL2 714 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 FAM193BQ96PV7 902 aaPredicted RBP12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 TCF25Q9BQ70 676 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 APOL6Q9BWW8 343 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 TMEM134Q9H6X4 195 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 BLOC1S4Q9NUP1 217 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 KANSL3Q9P2N6 904 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 BARX2Q9UMQ3 279 aaPredicted RBP12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 FAM50BQ9Y247 325 aa12.19□□□□□ -0.46
ARPC1B-216ENST00000474880 SFI1A8K8P3 1242 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 CUTAO60888 179 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 FAM13AO94988 1023 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 BRD1O95696 1058 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 SCP2P22307 547 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 DDIT3P35638 169 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 ALDH7A1P49419 539 aaKnown RBP12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 ZP2Q05996 745 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 STRN3Q13033 797 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 COASYQ13057 564 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 PKP1Q13835 747 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 DCAF4L1Q3SXM0 396 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 ATF7IP2Q5U623 682 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 USP49Q70CQ1 688 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 CDR2LQ86X02 465 aaPredicted RBP12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 ZNF280BQ86YH2 543 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 SMG8Q8ND04 991 aaKnown RBP12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 BCL7CQ8WUZ0 217 aaPredicted RBP12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 REEP2Q9BRK0 252 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 MRPL4Q9BYD3 311 aaKnown RBP12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 RNF39Q9H2S5 420 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 NXF3Q9H4D5 531 aaKnown RBP12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 PDZD7Q9H5P4 517 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 NGRNQ9NPE2 291 aaKnown RBP12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 ENTPD7Q9NQZ7 604 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 ARHGAP28Q9P2N2 729 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 DNAJB4Q9UDY4 337 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 GIT1Q9Y2X7 761 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 ATP6V1DQ9Y5K8 247 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 ZMYM2Q9UBW7 1377 aa12.18□□□□□ -0.46
ARPC1B-216ENST00000474880 NPHP3-ACAD11A0A0J9YXS1 232 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 C19orf67A6NJJ6 358 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 SLC16A4O15374 487 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 DDHD2O94830 711 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 GALTP07902 379 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 SSTR3P32745 418 aaPredicted RBP12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 STAT6P42226 847 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 ME1P48163 572 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 SLC11A1P49279 550 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 CACNB1Q02641 598 aaPredicted RBP12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 KCNC3Q14003 757 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 ARSHQ5FYA8 562 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 SV2BQ7L1I2 683 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 TMC7Q7Z402 723 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 ADHFE1Q8IWW8 467 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 MYCT1Q8N699 235 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 SMRP1Q8NCR6 262 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 LRRC15Q8TF66 581 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 TMEM169Q96HH4 297 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 IGSF21Q96ID5 467 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 RPS6KC1Q96S38 1066 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 CDCA3Q99618 268 aaPredicted RBP12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 NTPCRQ9BSD7 190 aaKnown RBP12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 GBP3Q9H0R5 595 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 ZHX3Q9H4I2 956 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 PARVGQ9HBI0 331 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 PRKAG3Q9UGI9 489 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 PARP2Q9UGN5 583 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 HES2Q9Y543 173 aa12.17□□□□□ -0.46
ARPC1B-216ENST00000474880 MTCL1Q9Y4B5 1905 aaKnown RBP12.16□□□□□ -0.46
ARPC1B-216ENST00000474880 C2orf71A6NGG8 1288 aa12.16□□□□□ -0.46
ARPC1B-216ENST00000474880 ARL5CA6NH57 179 aa12.16□□□□□ -0.46
ARPC1B-216ENST00000474880 PI4K2BG5E9Z4 385 aa12.16□□□□□ -0.46
ARPC1B-216ENST00000474880 POMCP01189 267 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms