RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 MFAP3LO75121 409 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 SEC31AO94979 1220 aaKnown RBP4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 TPM1P09493 284 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 GHRP10912 638 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 DARSP14868 501 aaKnown RBP4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 SCP2P22307 547 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 EIF4BP23588 611 aaKnown RBP4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 AXLP30530 894 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 ARL2P36404 184 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 PHKA2P46019 1235 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 NLRP11P59045 1033 aaKnown RBP4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 PPP2R3AQ06190 1150 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 LAMTOR4Q0VGL1 99 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 KCNJ12Q14500 433 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 RAB30Q15771 203 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 KIZQ2M2Z5 673 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 ZNF569Q5MCW4 686 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 C9orf50Q5SZB4 431 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 TMCO3Q6UWJ1 677 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 IRF2BP1Q8IU81 584 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 RHPN2Q8IUC4 686 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 CNGA4Q8IV77 575 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 ACRBPQ8NEB7 543 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 PIGOQ8TEQ8 1089 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 ZBTB10Q96DT7 871 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 IFT74Q96LB3 600 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 DRC1Q96MC2 740 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 PARD6BQ9BYG5 372 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 NFKBIZQ9BYH8 718 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 LRRC27Q9C0I9 530 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 TSPYL1Q9H0U9 437 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 POLR3FQ9H1D9 316 aaPredicted RBP4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 C2orf40Q9H1Z8 148 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 RASSF4Q9H2L5 321 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 ERVK-5Q9HDB9 667 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 CHST12Q9NRB3 414 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 C1orf112Q9NSG2 853 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 RMND1Q9NWS8 449 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 STK17AQ9UEE5 414 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 MSRAQ9UJ68 235 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 EVPLQ92817 2033 aa4.56□□□□□ -1.68
GAPVD1-216ENST00000474637 E9PMD0 336 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 H0YCG3 227 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 MYO1CO00159 1063 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ZBTB39O15060 712 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 KIF5CO60282 957 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ZRANB2O95218 330 aaKnown RBP eCLIP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 PLA2G4BP0C869 781 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 STAG3L1P0CL83 205 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 PNMA6AP0CW24 399 aaPredicted RBP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 SKIP12755 728 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ATP2A2P16615 1042 aaKnown RBP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 GUCY2CP25092 1073 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 CD52P31358 61 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ABCD1P33897 745 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 KRT9P35527 623 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 PLA2G4AP47712 749 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 GTF2A1P52655 376 aaPredicted RBP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 WDR5P61964 334 aaKnown RBP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 TMEM62Q0P6H9 643 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 GRB10Q13322 594 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ECM1Q16610 540 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 TEX35Q5T0J7 233 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 FAM102BQ5T8I3 360 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 RSRC2Q7L4I2 434 aaKnown RBP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 OTOP2Q7RTS6 562 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 TMTC1Q8IUR5 882 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ZBTB8OSQ8IWT0 167 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ADSSL1Q8N142 457 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 GPR161Q8N6U8 529 aaKnown RBP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 SYT2Q8N9I0 419 aaPredicted RBP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ANKRD20A12PQ8NF67 263 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 DBF4BQ8NFT6 615 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 LRRC15Q8TF66 581 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 PRPF31Q8WWY3 499 aaKnown RBP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 RSPH1Q8WYR4 309 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 TMEM143Q96AN5 459 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 VWCEQ96DN2 955 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 PNMA5Q96PV4 448 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 OSMRQ99650 979 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 CHP1Q99653 195 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 BHMT2Q9H2M3 363 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 CUEDC2Q9H467 287 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 C17orf75Q9HAS0 396 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 MAGEF1Q9HAY2 307 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 XPNPEP1Q9NQW7 623 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ABHD10Q9NUJ1 306 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ARGLU1Q9NWB6 273 aaPredicted RBP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 PUF60Q9UHX1 559 aaKnown RBP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 PADI3Q9ULW8 664 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 PCDHA11Q9Y5I1 949 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 A0A087WZ62 844 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 TTC26A0AVF1 554 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 DENND3A2RUS2 1198 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 KLRC4O43908 158 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 PLCG1P19174 1290 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 NAMPTP43490 491 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 SPAG1Q07617 926 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 FAM109BQ6ICB4 259 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms