RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 TRAF3IP3Q9Y228 551 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 LOXHD1Q8IVV2 1947 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 ABHD14A-ACY1A0A1B0GW23 586 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 TRIM49BA6NDI0 452 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 H0YCG3 227 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 INPPL1O15357 1258 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 B4GALT3O60512 393 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 ARHGEF15O94989 841 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 FGBP02675 491 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 TNFSF9P41273 254 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 GATMP50440 423 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 NLRP12P59046 1061 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 ZSCAN23Q3MJ62 389 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 SEZ6Q53EL9 994 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 XKR4Q5GH76 650 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 CLLU1OSQ5K130 101 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 ANKRD40Q6AI12 368 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 SCARA3Q6AZY7 606 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 NOTUMQ6P988 496 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 SLC27A1Q6PCB7 646 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 MPZL3Q6UWV2 235 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 ALKAL1Q6UXT8 129 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 C11orf57Q6ZUT1 292 aaPredicted RBP11.35□□□□□ -0.59
CASC3-204ENST00000474190 SLC24A5Q71RS6 500 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 RPUSD2Q8IZ73 545 aaKnown RBP11.35□□□□□ -0.59
CASC3-204ENST00000474190 TMEM130Q8N3G9 435 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 PLEKHO2Q8TD55 490 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 CCDC51Q96ER9 411 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 BORCS6Q96GS4 357 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 FTHL17Q9BXU8 183 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 FAM105AQ9NUU6 356 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 RMND1Q9NWS8 449 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 HOOK1Q9UJC3 728 aaKnown RBP11.35□□□□□ -0.59
CASC3-204ENST00000474190 IPPQ9Y573 584 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 PCDHB2Q9Y5E7 798 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 CDH23Q9H251 3354 aa11.35□□□□□ -0.59
CASC3-204ENST00000474190 PDXKO00764 312 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 HNRNPDLO14979 420 aaKnown RBP11.34□□□□□ -0.59
CASC3-204ENST00000474190 CLIC2O15247 247 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 BAIAP3O94812 1187 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 ERLIN2O94905 339 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 NPTXRO95502 500 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 MCF2P10911 925 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 PTMSP20962 102 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 STRN3Q13033 797 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 IKBKEQ14164 716 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 NAB2Q15742 525 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 NFIL3Q16649 462 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 SKOR2Q2VWA4 1001 aaPredicted RBP11.34□□□□□ -0.59
CASC3-204ENST00000474190 PSRC1Q6PGN9 363 aaPredicted RBP11.34□□□□□ -0.59
CASC3-204ENST00000474190 FAM43BQ6ZT52 329 aaPredicted RBP11.34□□□□□ -0.59
CASC3-204ENST00000474190 IRF2BP1Q8IU81 584 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 SLC9A9Q8IVB4 645 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.34□□□□□ -0.59
CASC3-204ENST00000474190 LPPQ93052 612 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 TOP1MTQ969P6 601 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 ZNF689Q96CS4 500 aaPredicted RBP11.34□□□□□ -0.59
CASC3-204ENST00000474190 GBP3Q9H0R5 595 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 HSD3B7Q9H2F3 369 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 TMEM206Q9H813 350 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 TYW1Q9NV66 732 aaKnown RBP11.34□□□□□ -0.59
CASC3-204ENST00000474190 MIOSQ9NXC5 875 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 MTMR10Q9NXD2 777 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 CPSF3Q9UKF6 684 aaKnown RBP11.34□□□□□ -0.59
CASC3-204ENST00000474190 PLAGL2Q9UPG8 496 aa11.34□□□□□ -0.59
CASC3-204ENST00000474190 SYCE3A1L190 88 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 PTGESO14684 152 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 N4BP3O15049 544 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 OFD1O75665 1012 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 FGFR1P11362 822 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 GARTP22102 1010 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 CCNE1P24864 410 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 GRM5P41594 1212 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 CASP4P49662 377 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 LIG4P49917 911 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 TYRO3Q06418 890 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 NOLC1Q14978 699 aaKnown RBP eCLIP11.33□□□□□ -0.6
CASC3-204ENST00000474190 NCAPHQ15003 741 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 ENOX2Q16206 610 aaKnown RBP11.33□□□□□ -0.6
CASC3-204ENST00000474190 SLC10A6Q3KNW5 377 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 C1orf220Q5T0J3 134 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 GPR153Q6NV75 609 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 FOXR2Q6PJQ5 311 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 ZBTB33Q86T24 672 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 P2RX5Q93086 422 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 CCDC34Q96HJ3 373 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 FAM84AQ96KN4 292 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 ZMAT2Q96NC0 199 aaKnown RBP11.33□□□□□ -0.6
CASC3-204ENST00000474190 PCIF1Q9H4Z3 704 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 ELAC1Q9H777 363 aaKnown RBP11.33□□□□□ -0.6
CASC3-204ENST00000474190 C1orf112Q9NSG2 853 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 SNTG2Q9NY99 539 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 HSPBP1Q9NZL4 362 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 ANKFY1Q9P2R3 1169 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 HCSTQ9UBK5 93 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 PRUNE2Q8WUY3 3088 aa11.33□□□□□ -0.6
CASC3-204ENST00000474190 TTC26A0AVF1 554 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 GRXCR1A8MXD5 290 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 OGTO15294 1046 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 CLDN3O15551 220 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms