RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 SCNN1GP51170 649 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 DNM1Q05193 864 aaKnown RBP15.62■□□□□ 0.09
VAMP4-203ENST00000474047 GIT2Q14161 759 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 EEF1DP3Q658K8 133 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 DYMQ7RTS9 669 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 TMC7Q7Z402 723 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 ZNF280BQ86YH2 543 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 SLC39A11Q8N1S5 342 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 LRRC15Q8TF66 581 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 ZFP42Q96MM3 310 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 SNTG2Q9NY99 539 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 TNFSF13BQ9Y275 285 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 GDAQ9Y2T3 454 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 ATP6V1DQ9Y5K8 247 aa15.62■□□□□ 0.09
VAMP4-203ENST00000474047 CDH23Q9H251 3354 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 GALTP07902 379 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 IRS1P35568 1242 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 AFF1P51825 1210 aaKnown RBP15.61■□□□□ 0.09
VAMP4-203ENST00000474047 TFF2Q03403 129 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 ZNF568Q3ZCX4 644 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 ZBTB33Q86T24 672 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 RBM23Q86U06 439 aaKnown RBP15.61■□□□□ 0.09
VAMP4-203ENST00000474047 TMEM87AQ8NBN3 555 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 ASB2Q96Q27 587 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 ACO2Q99798 780 aaKnown RBP15.61■□□□□ 0.09
VAMP4-203ENST00000474047 TCF25Q9BQ70 676 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 TMEM175Q9BSA9 504 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 TARS2Q9BW92 718 aaKnown RBP15.61■□□□□ 0.09
VAMP4-203ENST00000474047 TLE6Q9H808 572 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 CLDND1Q9NY35 253 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 DNAJB4Q9UDY4 337 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 PLXNA4Q9HCM2 1894 aa15.61■□□□□ 0.09
VAMP4-203ENST00000474047 MYO7AQ13402 2215 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 K7ENM7 598 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 TRAK2O60296 914 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 DDHD2O94830 711 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 EDN1P05305 212 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 OR1G1P47890 313 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 SLC11A1P49279 550 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 CAMK1Q14012 370 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 PLPP4Q5VZY2 271 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 HAUS6Q7Z4H7 955 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 FAM178BQ8IXR5 827 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 TMEM161BQ8NDZ6 487 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 CCDC94Q9BW85 323 aaPredicted RBP15.6■□□□□ 0.09
VAMP4-203ENST00000474047 UBE2ZQ9H832 354 aaPredicted RBP15.6■□□□□ 0.09
VAMP4-203ENST00000474047 FAM13BQ9NYF5 915 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 BRD1O95696 1058 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 MAPTP10636 758 aaKnown RBP15.6■□□□□ 0.09
VAMP4-203ENST00000474047 HARSP12081 509 aaKnown RBP15.6■□□□□ 0.09
VAMP4-203ENST00000474047 SCP2P22307 547 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 KCNA5P22460 613 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 NRIP1P48552 1158 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 YARSP54577 528 aaKnown RBP15.6■□□□□ 0.09
VAMP4-203ENST00000474047 ERVFC1P60507 584 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 TJAP1Q5JTD0 557 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 DDX12PQ92771 950 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 IGSF21Q96ID5 467 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 LRRC27Q9C0I9 530 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 NGRNQ9NPE2 291 aaKnown RBP15.6■□□□□ 0.09
VAMP4-203ENST00000474047 MIOSQ9NXC5 875 aa15.6■□□□□ 0.09
VAMP4-203ENST00000474047 RECQL4O94761 1208 aa15.59■□□□□ 0.09
VAMP4-203ENST00000474047 ABCD1P33897 745 aa15.59■□□□□ 0.09
VAMP4-203ENST00000474047 NCKAP1LP55160 1127 aa15.59■□□□□ 0.09
VAMP4-203ENST00000474047 OSTNP61366 133 aa15.59■□□□□ 0.09
VAMP4-203ENST00000474047 KRT85P78386 507 aa15.59■□□□□ 0.09
VAMP4-203ENST00000474047 HYAL1Q12794 435 aa15.59■□□□□ 0.09
VAMP4-203ENST00000474047 GRIK3Q13003 919 aa15.59■□□□□ 0.09
VAMP4-203ENST00000474047 TAS1R3Q7RTX0 852 aa15.59■□□□□ 0.09
VAMP4-203ENST00000474047 PABPC5Q96DU9 382 aaKnown RBP15.59■□□□□ 0.09
VAMP4-203ENST00000474047 COLEC11Q9BWP8 271 aa15.59■□□□□ 0.09
VAMP4-203ENST00000474047 ANKFY1Q9P2R3 1169 aa15.59■□□□□ 0.09
VAMP4-203ENST00000474047 PCDHA7Q9UN72 937 aa15.59■□□□□ 0.09
VAMP4-203ENST00000474047 PRG3Q9Y2Y8 225 aaPredicted RBP15.59■□□□□ 0.09
VAMP4-203ENST00000474047 PCDHGC5Q9Y5F6 944 aa15.59■□□□□ 0.09
VAMP4-203ENST00000474047 NRP1O14786 923 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 INPPL1O15357 1258 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 CXCL14O95715 111 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 THP07101 528 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 MCF2P10911 925 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 IDEP14735 1019 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 LIG4P49917 911 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 ZNF131P52739 623 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 SMC1AQ14683 1233 aaKnown RBP15.58■□□□□ 0.08
VAMP4-203ENST00000474047 MPZL3Q6UWV2 235 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 ADGRD2Q7Z7M1 963 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 DDX53Q86TM3 631 aaKnown RBP15.58■□□□□ 0.08
VAMP4-203ENST00000474047 COLGALT2Q8IYK4 626 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 VPS52Q8N1B4 723 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 IQUBQ8NA54 791 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 DHX58Q96C10 678 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 SPATA32Q96LK8 384 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 CDT1Q9H211 546 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 TOPORSQ9NS56 1045 aaPredicted RBP15.58■□□□□ 0.08
VAMP4-203ENST00000474047 STK39Q9UEW8 545 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 ZMYM2Q9UBW7 1377 aa15.58■□□□□ 0.08
VAMP4-203ENST00000474047 TDRD15B5MCY1 1934 aaKnown RBP15.58■□□□□ 0.08
VAMP4-203ENST00000474047 A0A087X0B3 334 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 MYMKA6NI61 221 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 PER2O15055 1255 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms