RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 NHLH2Q02577 135 aa5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 TRIM25Q14258 630 aaKnown RBP5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 BMT2Q1RMZ1 405 aa5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 CNNM4Q6P4Q7 775 aa5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 CCDC62Q6P9F0 684 aa5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 NIM1KQ8IY84 436 aa5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 UBXN4Q92575 508 aa5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 GPR101Q96P66 508 aaPredicted RBP5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 BBC3Q96PG8 261 aaPredicted RBP5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 TARS2Q9BW92 718 aaKnown RBP5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 WDR11Q9BZH6 1224 aa5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 MS4A5Q9H3V2 200 aa5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 PIF1Q9H611 641 aa5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 EPN1Q9Y6I3 576 aaPredicted RBP5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 POLR2AP24928 1970 aaKnown RBP5.35□□□□□ -1.55
GPCPD1-204ENST00000473797 ZMYM3Q14202 1370 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 PIPSLA2A3N6 862 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 MARCH11A6NNE9 402 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 TMEM127O75204 238 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 FKBP9O95302 570 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 CLEC2LP0C7M8 214 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 RBP3P10745 1247 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 CLK3P49761 638 aaKnown RBP5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 BLOC1S1P78537 153 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 PPARAQ07869 468 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 HNRNPA0Q13151 305 aaKnown RBP5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 SART3Q15020 963 aaKnown RBP5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 C21orf62-AS1Q17RA5 79 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 ABHD15Q6UXT9 468 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 FKBP9P1Q75LS8 142 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 RASSF3Q86WH2 238 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 OR2W6PQ8NHA6 318 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 PAWRQ96IZ0 340 aaKnown RBP5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 DRC1Q96MC2 740 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 ANO3Q9BYT9 981 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 PRDM12Q9H4Q4 367 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 PLAAQ9Y263 795 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 CDY2AQ9Y6F7 541 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 COX11Q9Y6N1 276 aa5.34□□□□□ -1.55
GPCPD1-204ENST00000473797 NDUFA10O95299 355 aa5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 TYRP1P17643 537 aa5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 AVPR1BP47901 424 aa5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 RNASE9P60153 205 aaKnown RBP5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 DALRD3Q5D0E6 543 aaKnown RBP5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 COLEC12Q5KU26 742 aa5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 FAM102AQ5T9C2 384 aaPredicted RBP5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 STRIP1Q5VSL9 837 aa5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 BROXQ5VW32 411 aa5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 ANKS6Q68DC2 871 aa5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 ADGRG3Q86Y34 549 aa5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 CDC5LQ99459 802 aaKnown RBP5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 EMC7Q9NPA0 242 aa5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 FANCLQ9NW38 375 aa5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 PTGFRNQ9P2B2 879 aa5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 ANKFY1Q9P2R3 1169 aa5.33□□□□□ -1.56
GPCPD1-204ENST00000473797 COL11A2P13942 1736 aaPredicted RBP5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 ZNF185O15231 689 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 ITGA10O75578 1167 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 EGR2P11161 476 aaPredicted RBP5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 CTSSP25774 331 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 CRHR1P34998 444 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 SEC24CP53992 1094 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 PDCD4Q53EL6 469 aaKnown RBP5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 PITRM1Q5JRX3 1037 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 ABHD17BQ5VST6 288 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 ARMC6Q6NXE6 501 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 EFCAB12Q6NXP0 572 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 SYCE2Q6PIF2 218 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 C11orf74Q86VG3 221 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 DHX37Q8IY37 1157 aaKnown RBP5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 LCORLQ8N3X6 602 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 CPEB3Q8NE35 698 aaKnown RBP5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 SUPT20HQ8NEM7 779 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 OR10H5Q8NGA6 315 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 SLC5A5Q92911 643 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 FEZ1Q99689 392 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 ADAM2Q99965 735 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 TEX101Q9BY14 249 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 SPON1Q9HCB6 807 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 ALG13Q9NP73 1137 aaKnown RBP5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 GPRC5DQ9NZD1 345 aa5.32□□□□□ -1.56
GPCPD1-204ENST00000473797 GSG1L2A8MUP6 293 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 KIAA0355O15063 1070 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 PJA2O43164 708 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 KDM1AO60341 852 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 HLA-DOAP06340 250 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 SPATA31D3P0C874 917 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 HKR1P10072 659 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 C21orf58P58505 322 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 GUCY1B3Q02153 619 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 PRR16Q569H4 304 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 LRCH2Q5VUJ6 765 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 SPATA31D4Q6ZUB0 917 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 PDZD4Q76G19 769 aaPredicted RBP5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 KIAA0907Q7Z7F0 614 aaPredicted RBP5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 FUBP1Q96AE4 644 aaKnown RBP5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 MFSD3Q96ES6 412 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 PRDM13Q9H4Q3 707 aa5.31□□□□□ -1.56
GPCPD1-204ENST00000473797 RPTORQ8N122 1335 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms