RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 TNFSF13BQ9Y275 285 aa10.07□□□□□ -0.8
SYN3-211ENST00000472027 FAN1Q9Y2M0 1017 aa10.07□□□□□ -0.8
SYN3-211ENST00000472027 PCDHGC5Q9Y5F6 944 aa10.07□□□□□ -0.8
SYN3-211ENST00000472027 EYSQ5T1H1 3165 aa10.07□□□□□ -0.8
SYN3-211ENST00000472027 KIAA1671Q9BY89 1806 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 CARNS1A5YM72 827 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 DLL1O00548 723 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 PER2O15055 1255 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 CUTAO60888 179 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 FAM13AO94988 1023 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 KRT18P05783 430 aaKnown RBP10.06□□□□□ -0.8
SYN3-211ENST00000472027 BMP1P13497 986 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 KCNA5P22460 613 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 NRIP1P48552 1158 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 KCNQ1P51787 676 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 STRN3Q13033 797 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 ADAM15Q13444 863 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 COL19A1Q14993 1142 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 CTC1Q2NKJ3 1217 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 DCAF4L1Q3SXM0 396 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 PLPP4Q5VZY2 271 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 ATL3Q6DD88 541 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 CCDC73Q6ZRK6 1079 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 EP400NLQ6ZTU2 488 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 SV2BQ7L1I2 683 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 TMC7Q7Z402 723 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 TMEM173Q86WV6 379 aaPredicted RBP10.06□□□□□ -0.8
SYN3-211ENST00000472027 COLGALT2Q8IYK4 626 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 MYCT1Q8N699 235 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 PPP2R3CQ969Q6 453 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 TMEM169Q96HH4 297 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 TMEM175Q9BSA9 504 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 TARS2Q9BW92 718 aaKnown RBP10.06□□□□□ -0.8
SYN3-211ENST00000472027 COL25A1Q9BXS0 654 aaPredicted RBP10.06□□□□□ -0.8
SYN3-211ENST00000472027 ZHX3Q9H4I2 956 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 TLE6Q9H808 572 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 PARVGQ9HBI0 331 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 PTPRHQ9HD43 1115 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 NGRNQ9NPE2 291 aaKnown RBP10.06□□□□□ -0.8
SYN3-211ENST00000472027 CLDND1Q9NY35 253 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 STK17AQ9UEE5 414 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 CFAP45Q9UL16 551 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 ZDHHC9Q9Y397 364 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 MYO9BQ13459 2157 aa10.06□□□□□ -0.8
SYN3-211ENST00000472027 PRRC2BQ5JSZ5 2229 aaKnown RBP10.05□□□□□ -0.8
SYN3-211ENST00000472027 A0A087X0B3 334 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 H0YCG3 227 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 LINC01565O15544 149 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 TRAK2O60296 914 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 RECQL4O94761 1208 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 BRD1O95696 1058 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 CXCL14O95715 111 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 MAPTP10636 758 aaKnown RBP10.05□□□□□ -0.8
SYN3-211ENST00000472027 PROZP22891 400 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 LTBRP36941 435 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 OR1G1P47890 313 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 ZNF131P52739 623 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 NCKAP1LP55160 1127 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 DNM1Q05193 864 aaKnown RBP10.05□□□□□ -0.8
SYN3-211ENST00000472027 DLX2Q07687 328 aaPredicted RBP10.05□□□□□ -0.8
SYN3-211ENST00000472027 DSC1Q08554 894 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 BECN1Q14457 450 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 LEXMQ3ZCV2 418 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 DYMQ7RTS9 669 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 HAUS6Q7Z4H7 955 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 APBB1IPQ7Z5R6 666 aaPredicted RBP10.05□□□□□ -0.8
SYN3-211ENST00000472027 ZBTB33Q86T24 672 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 DDX53Q86TM3 631 aaKnown RBP10.05□□□□□ -0.8
SYN3-211ENST00000472027 VPS52Q8N1B4 723 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 PDILTQ8N807 584 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 MRPL43Q8N983 215 aaKnown RBP10.05□□□□□ -0.8
SYN3-211ENST00000472027 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.05□□□□□ -0.8
SYN3-211ENST00000472027 BCL7CQ8WUZ0 217 aaPredicted RBP10.05□□□□□ -0.8
SYN3-211ENST00000472027 DDX12PQ92771 950 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 ZBTB45Q96K62 511 aaPredicted RBP10.05□□□□□ -0.8
SYN3-211ENST00000472027 RPS6KC1Q96S38 1066 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 TCHPQ9BT92 498 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 CXCL16Q9H2A7 254 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 ENTPD7Q9NQZ7 604 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 GDAQ9Y2T3 454 aa10.05□□□□□ -0.8
SYN3-211ENST00000472027 MYMKA6NI61 221 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 HIDE1A8MVS5 230 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 H3BQ06 376 aaPredicted RBP10.04□□□□□ -0.8
SYN3-211ENST00000472027 ABLIM1O14639 778 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 PTGESO14684 152 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 TBCAO75347 108 aaKnown RBP10.04□□□□□ -0.8
SYN3-211ENST00000472027 NR1I2O75469 434 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 TOM1L1O75674 476 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 THP07101 528 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 MCF2P10911 925 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 GRM5P41594 1212 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 STAT6P42226 847 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 GRIK3Q13003 919 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 SMC1AQ14683 1233 aaKnown RBP10.04□□□□□ -0.8
SYN3-211ENST00000472027 BMS1Q14692 1282 aaKnown RBP10.04□□□□□ -0.8
SYN3-211ENST00000472027 DUSP6Q16828 381 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 ZNF568Q3ZCX4 644 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 AXDND1Q5T1B0 1012 aaPredicted RBP10.04□□□□□ -0.8
SYN3-211ENST00000472027 SHC4Q6S5L8 630 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 MPZL3Q6UWV2 235 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms