RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 DRICH1Q6PGQ1 229 aaPredicted RBP4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 SPATA31D4Q6ZUB0 917 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 GPRIN1Q7Z2K8 1008 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 LILRA3Q8N6C8 439 aaPredicted RBP4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 SNX33Q8WV41 574 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 SLC5A5Q92911 643 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 MS4A5Q9H3V2 200 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 TOR3AQ9H497 397 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 SERHL2Q9H4I8 314 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 ANKFY1Q9P2R3 1169 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 TMPRSS11EQ9UL52 423 aa4.93□□□□□ -1.62
PRPF40A-207ENST00000471701 ZMYM3Q14202 1370 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 CENPVL1A0A0U1RR11 272 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 TMEM200CA6NKL6 621 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 B5MCH6 92 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 LEFTY2O00292 366 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 NCR1O76036 304 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 ADRA1BP35368 520 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 AVPR1BP47901 424 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 LGALS4P56470 323 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 MXRA7P84157 204 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 UGT8Q16880 541 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 CT83Q5H943 113 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 STRIP1Q5VSL9 837 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 ABHD15Q6UXT9 468 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 PLXDC1Q8IUK5 500 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 TFAP2CQ92754 450 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 USP7Q93009 1102 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 WDR11Q9BZH6 1224 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 EMC7Q9NPA0 242 aa4.92□□□□□ -1.62
PRPF40A-207ENST00000471701 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 ZAR1LA6NP61 321 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 LPXNO60711 386 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 PHF2O75151 1096 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 ITGA10O75578 1167 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 LPLP06858 475 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 TGM1P22735 817 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 BMPR1AP36894 532 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 ZEB1P37275 1124 aaPredicted RBP4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 FAM189BP81408 668 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 TRIM25Q14258 630 aaKnown RBP4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 TAF7LQ5H9L4 462 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 FAM180AQ6UWF9 173 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 ARHGEF19Q8IW93 802 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 OR10H5Q8NGA6 315 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 ZFP28Q8NHY6 868 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 MDM1Q8TC05 714 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 CAVIN3Q969G5 261 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 GPRC5DQ9NZD1 345 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 CDY2AQ9Y6F7 541 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 MRPL42Q9Y6G3 142 aaKnown RBP4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 RPTORQ8N122 1335 aa4.91□□□□□ -1.62
PRPF40A-207ENST00000471701 MYCLP1P12525 358 aaPredicted RBP4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 CTSSP25774 331 aa4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 GUCY1B3Q02153 619 aa4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 BMT2Q1RMZ1 405 aa4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 PITRM1Q5JRX3 1037 aa4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 ANKS6Q68DC2 871 aa4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 OLFML1Q6UWY5 402 aa4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 DDX46Q7L014 1031 aaKnown RBP4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 LYSMD2Q8IV50 215 aa4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 SLC41A1Q8IVJ1 513 aa4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 CMTR2Q8IYT2 770 aaKnown RBP4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 EAF2Q96CJ1 260 aaPredicted RBP4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 KCTD10Q9H3F6 313 aa4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 PTGFRNQ9P2B2 879 aa4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 MAPRE3Q9UPY8 281 aa4.9□□□□□ -1.63
PRPF40A-207ENST00000471701 GRID2IPA4D2P6 1211 aa4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 ULK1O75385 1050 aa4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 ZSCAN20P17040 1043 aaPredicted RBP4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 ZFP36P26651 326 aaKnown RBP4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 CANXP27824 592 aaKnown RBP4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 CRHR1P34998 444 aa4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 PTPN7P35236 360 aa4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 ERCC6LQ2NKX8 1250 aa4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 BEND2Q8NDZ0 799 aa4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 CPEB3Q8NE35 698 aaKnown RBP4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 RAX2Q96IS3 184 aa4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 RNF181Q9P0P0 153 aa4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 ATP11BQ9Y2G3 1177 aa4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 USP15Q9Y4E8 981 aaPredicted RBP4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 PCSK5Q92824 1860 aa4.89□□□□□ -1.63
PRPF40A-207ENST00000471701 KIAA0355O15063 1070 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 ZNF185O15231 689 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 ZEB2O60315 1214 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 PDE8AO60658 829 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 HKR1P10072 659 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 ADSLP30566 484 aaPredicted RBP4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 BEAN1Q3B7T3 259 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 SPDYE7PQ495Y7 208 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 PDCD4Q53EL6 469 aaKnown RBP4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 FAM47AQ5JRC9 791 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 Q6YL49 198 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 SYT12Q8IV01 421 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 ZNF480Q8WV37 535 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 PHACTR3Q96KR7 559 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 ACAP3Q96P50 834 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 TTC1Q99614 292 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 PRDM12Q9H4Q4 367 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 IFT22Q9H7X7 185 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms