RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 ENOX2Q16206 610 aaKnown RBP10.82□□□□□ -0.68
SF3A1-207ENST00000471342 ATF7IP2Q5U623 682 aa10.82□□□□□ -0.68
SF3A1-207ENST00000471342 AGMOQ6ZNB7 445 aa10.82□□□□□ -0.68
SF3A1-207ENST00000471342 LMO3Q8TAP4 145 aa10.82□□□□□ -0.68
SF3A1-207ENST00000471342 SAAL1Q96ER3 474 aa10.82□□□□□ -0.68
SF3A1-207ENST00000471342 CCDC43Q96MW1 224 aaKnown RBP10.82□□□□□ -0.68
SF3A1-207ENST00000471342 ZMAT2Q96NC0 199 aaKnown RBP10.82□□□□□ -0.68
SF3A1-207ENST00000471342 NAP1L5Q96NT1 182 aaPredicted RBP10.82□□□□□ -0.68
SF3A1-207ENST00000471342 SRRTQ9BXP5 876 aaKnown RBP10.82□□□□□ -0.68
SF3A1-207ENST00000471342 MRPL4Q9BYD3 311 aaKnown RBP10.82□□□□□ -0.68
SF3A1-207ENST00000471342 RGS18Q9NS28 235 aa10.82□□□□□ -0.68
SF3A1-207ENST00000471342 MIOSQ9NXC5 875 aa10.82□□□□□ -0.68
SF3A1-207ENST00000471342 LIMA1Q9UHB6 759 aaKnown RBP10.82□□□□□ -0.68
SF3A1-207ENST00000471342 KCNG1Q9UIX4 513 aa10.82□□□□□ -0.68
SF3A1-207ENST00000471342 TTC26A0AVF1 554 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 GOLGA8IPA6NC78 632 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 GOLGA8JA6NMD2 632 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 DCDC2CA8MYV0 355 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 PTGESO14684 152 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 PSMA7O14818 248 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 MAPK13O15264 365 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 INPPL1O15357 1258 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 B4GALT3O60512 393 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 RPS6KA5O75582 802 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 LINC00271P0C7V0 271 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 MCF2P10911 925 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 CSF2RAP15509 400 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 PPP1R2P41236 205 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 FKBP3Q00688 224 aaKnown RBP10.81□□□□□ -0.68
SF3A1-207ENST00000471342 PPP3CAQ08209 521 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 ADAM9Q13443 819 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 RASIP1Q5U651 963 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 MFSD5Q6N075 450 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 MPZL3Q6UWV2 235 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 CD300LGQ6UXG3 332 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 RNF214Q8ND24 703 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 SLC35C1Q96A29 364 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 CCDC34Q96HJ3 373 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 CEP63Q96MT8 703 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 PPP1R12CQ9BZL4 782 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 TSPYL2Q9H2G4 693 aaPredicted RBP10.81□□□□□ -0.68
SF3A1-207ENST00000471342 NXF3Q9H4D5 531 aaKnown RBP10.81□□□□□ -0.68
SF3A1-207ENST00000471342 THAP9Q9H5L6 903 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 RC3H2Q9HBD1 1191 aaKnown RBP10.81□□□□□ -0.68
SF3A1-207ENST00000471342 TMEM39AQ9NV64 488 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 PLAGL2Q9UPG8 496 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 GINS2Q9Y248 185 aa10.81□□□□□ -0.68
SF3A1-207ENST00000471342 A0A0U1RQF3 1178 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 H0YCG3 227 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 EXTL3O43909 919 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 NR2F2P24468 414 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 AXLP30530 894 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 GRM5P41594 1212 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 ACOT2P49753 483 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 KCNMA1Q12791 1236 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 BFSP2Q13515 415 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 HSP90AA4PQ58FG1 418 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.8□□□□□ -0.68
SF3A1-207ENST00000471342 CATSPER4Q7RTX7 472 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 ZBTB8OSQ8IWT0 167 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 EFCAB13Q8IY85 973 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 CSGALNACT2Q8N6G5 542 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 USP38Q8NB14 1042 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 PARD3BQ8TEW8 1205 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 POP1Q99575 1024 aaKnown RBP10.8□□□□□ -0.68
SF3A1-207ENST00000471342 MKNK1Q9BUB5 465 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 CHST12Q9NRB3 414 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 TOPORSQ9NS56 1045 aaPredicted RBP10.8□□□□□ -0.68
SF3A1-207ENST00000471342 CGNQ9P2M7 1197 aaKnown RBP10.8□□□□□ -0.68
SF3A1-207ENST00000471342 AGO2Q9UKV8 859 aaKnown RBP10.8□□□□□ -0.68
SF3A1-207ENST00000471342 IPPQ9Y573 584 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 SCN5AQ14524 2016 aa10.8□□□□□ -0.68
SF3A1-207ENST00000471342 LTBP2Q14767 1821 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 TANC1Q9C0D5 1861 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 LAMA3Q16787 3333 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 LRRIQ3A6PVS8 624 aaPredicted RBP10.79□□□□□ -0.68
SF3A1-207ENST00000471342 HNRNPDLO14979 420 aaKnown RBP10.79□□□□□ -0.68
SF3A1-207ENST00000471342 GPR182O15218 404 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 OGTO15294 1046 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 TEX33O43247 280 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 VNN1O95497 513 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 NPTXRO95502 500 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 CAVIN2O95810 425 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 C4BPAP04003 597 aaKnown RBP10.79□□□□□ -0.68
SF3A1-207ENST00000471342 STAG3L1P0CL83 205 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 LIG4P49917 911 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 POU5F1Q01860 360 aaKnown RBP10.79□□□□□ -0.68
SF3A1-207ENST00000471342 CYP24A1Q07973 514 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 NR1I3Q14994 352 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 KRT31Q15323 416 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 PTPN21Q16825 1174 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 TCP11X2Q5H9J9 407 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 SLC27A1Q6PCB7 646 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 SARM1Q6SZW1 724 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 ZBTB33Q86T24 672 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 RSPH3Q86UC2 560 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 ECHDC2Q86YB7 292 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 BRSK2Q8IWQ3 736 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 CCDC155Q8N6L0 562 aa10.79□□□□□ -0.68
SF3A1-207ENST00000471342 XXYLT1Q8NBI6 393 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms