RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 PTPN14Q15678 1187 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 ECM1Q16610 540 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 MCTP1Q6DN14 999 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 DEPTORQ8TB45 409 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 BCL7CQ8WUZ0 217 aaPredicted RBP14.9□□□□□ -0.02
HMGN1-211ENST00000471260 GBP4Q96PP9 640 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 ADPGKQ9BRR6 497 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 COLEC11Q9BWP8 271 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 NXF3Q9H4D5 531 aaKnown RBP14.9□□□□□ -0.02
HMGN1-211ENST00000471260 MRPL17Q9NRX2 175 aaKnown RBP14.9□□□□□ -0.02
HMGN1-211ENST00000471260 DDX19AQ9NUU7 478 aaKnown RBP14.9□□□□□ -0.02
HMGN1-211ENST00000471260 KCNG1Q9UIX4 513 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 HCN4Q9Y3Q4 1203 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 PHLPP2Q6ZVD8 1323 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 K7ELQ4 463 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-211ENST00000471260 LILRB3O75022 631 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 NPTXRO95502 500 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 OR1G1P47890 313 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 SCNN1GP51170 649 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 ATP2C1P98194 919 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-211ENST00000471260 GRIK3Q13003 919 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 ARL6IP4Q66PJ3 421 aaKnown RBP14.89□□□□□ -0.03
HMGN1-211ENST00000471260 GPR65Q8IYL9 337 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 RNF168Q8IYW5 571 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-211ENST00000471260 GSTCDQ8NEC7 633 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 SLC22A17Q8WUG5 538 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 BSNDQ8WZ55 320 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 RIPOR3Q96MK2 946 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 ZFP42Q96MM3 310 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 RPS6KC1Q96S38 1066 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 APOL6Q9BWW8 343 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 VN1R3Q9BXE9 311 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 CCDC113Q9H0I3 377 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 C17orf75Q9HAS0 396 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 MIOSQ9NXC5 875 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 PARP2Q9UGN5 583 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 SMC3Q9UQE7 1217 aa14.89□□□□□ -0.03
HMGN1-211ENST00000471260 FAM86C2PA6NEL3 165 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 CD2BP2O95400 341 aaKnown RBP14.88□□□□□ -0.03
HMGN1-211ENST00000471260 EFEMP2O95967 443 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 C1RP00736 705 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 PRKCBP05771 671 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 URODP06132 367 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 AKAP5P24588 427 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 MTHFRP42898 656 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 HYIQ5T013 277 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 APBB1IPQ7Z5R6 666 aaPredicted RBP14.88□□□□□ -0.03
HMGN1-211ENST00000471260 AUTS2Q8WXX7 1259 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 EDAQ92838 391 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 RPGRIP1Q96KN7 1286 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 KLHL5Q96PQ7 755 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 HERC2P3Q9BVR0 1158 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 TIPINQ9BVW5 301 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 NT5C3AQ9H0P0 336 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 MARCH5Q9NX47 278 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 DPP7Q9UHL4 492 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 MUTYHQ9UIF7 546 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 NR2E1Q9Y466 385 aa14.88□□□□□ -0.03
HMGN1-211ENST00000471260 C5orf42Q9H799 3197 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 K7ERI5 159 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 SLC26A4O43511 780 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 KLRC2P26717 231 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 CLCN4P51793 760 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 IL17AQ16552 155 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 TMEM132AQ24JP5 1023 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 DCAF4L1Q3SXM0 396 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 ATAT1Q5SQI0 421 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 CABP7Q86V35 215 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 CDR2LQ86X02 465 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-211ENST00000471260 DRC1Q96MC2 740 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 PDZD7Q9H5P4 517 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 SFXN1Q9H9B4 322 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 CHST7Q9NS84 486 aa14.87□□□□□ -0.03
HMGN1-211ENST00000471260 PRG3Q9Y2Y8 225 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-211ENST00000471260 TDRD15B5MCY1 1934 aaKnown RBP14.87□□□□□ -0.03
HMGN1-211ENST00000471260 E9PMD0 336 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 BMP15O95972 392 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 THP07101 528 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 CNPP09543 421 aaKnown RBP14.86□□□□□ -0.03
HMGN1-211ENST00000471260 EPCAMP16422 314 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 GLUD2P49448 558 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 DSG1Q02413 1049 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 DMP1Q13316 513 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-211ENST00000471260 SKOR2Q2VWA4 1001 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-211ENST00000471260 KIAA0319Q5VV43 1072 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 LARP1BQ659C4 914 aaKnown RBP14.86□□□□□ -0.03
HMGN1-211ENST00000471260 KIAA1841Q6NSI8 718 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 RINT1Q6NUQ1 792 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 ELMSAN1Q6PJG2 1045 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 CLEC17AQ6ZS10 378 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 AK8Q96MA6 479 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 MMTAG2Q9BU76 263 aaKnown RBP14.86□□□□□ -0.03
HMGN1-211ENST00000471260 TMEM134Q9H6X4 195 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 RXFP1Q9HBX9 757 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.86□□□□□ -0.03
HMGN1-211ENST00000471260 KCND2Q9NZV8 630 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 USTQ9Y2C2 406 aa14.86□□□□□ -0.03
HMGN1-211ENST00000471260 SSBP05455 408 aaKnown RBP eCLIP14.85□□□□□ -0.03
HMGN1-211ENST00000471260 ADH1AP07327 375 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 GUCY2CP25092 1073 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms