RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 POLR2AP24928 1970 aaKnown RBP2.06□□□□□ -2.08
UBXN4-207ENST00000471246 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-207ENST00000471246 TLDC2A0PJX2 215 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 TRIM24O15164 1050 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 HOXA3O43365 443 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-207ENST00000471246 ZEB2O60315 1214 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 DNAJC6O75061 913 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 ULK1O75385 1050 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 ENPP1P22413 925 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 NR4A1P22736 598 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 HSD3B2P26439 372 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 PTGS2P35354 604 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 MRPL49Q13405 166 aaKnown RBP2.05□□□□□ -2.08
UBXN4-207ENST00000471246 UBE3CQ15386 1083 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 VPS72Q15906 364 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 FSCN1Q16658 493 aaKnown RBP2.05□□□□□ -2.08
UBXN4-207ENST00000471246 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.05□□□□□ -2.08
UBXN4-207ENST00000471246 SDE2Q6IQ49 451 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 ABHD15Q6UXT9 468 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 LRRC55Q6ZSA7 311 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 DDX46Q7L014 1031 aaKnown RBP2.05□□□□□ -2.08
UBXN4-207ENST00000471246 DOK3Q7L591 496 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 STRA8Q7Z7C7 330 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 AFAP1L2Q8N4X5 818 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 ZNF276Q8N554 614 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 LILRA3Q8N6C8 439 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-207ENST00000471246 GLB1L3Q8NCI6 653 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-207ENST00000471246 OR52N2Q8NGI0 321 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 SLC25A43Q8WUT9 341 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-207ENST00000471246 CHAC2Q8WUX2 184 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 ZNF480Q8WV37 535 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 RSAD2Q8WXG1 361 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 ACAP3Q96P50 834 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 CPPED1Q9BRF8 314 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-207ENST00000471246 PDCD2LQ9BRP1 358 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 NRDE2Q9H7Z3 1164 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 CAAP1Q9H8G2 361 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 TRPS1Q9UHF7 1281 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 EDARQ9UNE0 448 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 SORCS3Q9UPU3 1222 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 XDHP47989 1333 aa2.05□□□□□ -2.08
UBXN4-207ENST00000471246 ADCY6O43306 1168 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 ITGA10O75578 1167 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 SCAF4O95104 1147 aaKnown RBP2.04□□□□□ -2.08
UBXN4-207ENST00000471246 CTSSP25774 331 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 ZFP36P26651 326 aaKnown RBP2.04□□□□□ -2.08
UBXN4-207ENST00000471246 CANXP27824 592 aaKnown RBP2.04□□□□□ -2.08
UBXN4-207ENST00000471246 APOBEC3AP31941 199 aaPredicted RBP2.04□□□□□ -2.08
UBXN4-207ENST00000471246 CCT2P78371 535 aaKnown RBP2.04□□□□□ -2.08
UBXN4-207ENST00000471246 TMPRSS15P98073 1019 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 ZMYM3Q14202 1370 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 STAT4Q14765 748 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 UGT8Q16880 541 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 MST1LQ2TV78 715 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 CT47A1Q5JQC4 288 aaPredicted RBP2.04□□□□□ -2.08
UBXN4-207ENST00000471246 METTL24Q5JXM2 366 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 PRAMEF14Q5SWL7 426 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 RHOUQ7L0Q8 258 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 MRGPREQ86SM8 312 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 FAM83AQ86UY5 434 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 XYLT1Q86Y38 959 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 SYNE4Q8N205 404 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 C9orf106Q8NAJ2 232 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 MDM1Q8TC05 714 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 CPT1CQ8TCG5 803 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 TSPEARQ8WU66 669 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 TGFBRAP1Q8WUH2 860 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 SNX33Q8WV41 574 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 EAF2Q96CJ1 260 aaPredicted RBP2.04□□□□□ -2.08
UBXN4-207ENST00000471246 RAX2Q96IS3 184 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 CDC5LQ99459 802 aaKnown RBP2.04□□□□□ -2.08
UBXN4-207ENST00000471246 TTPALQ9BTX7 342 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 MLST8Q9BVC4 326 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 QRSL1Q9H0R6 528 aaKnown RBP2.04□□□□□ -2.08
UBXN4-207ENST00000471246 GPRC5DQ9NZD1 345 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 DPP7Q9UHL4 492 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 EIF2B4Q9UI10 523 aaKnown RBP2.04□□□□□ -2.08
UBXN4-207ENST00000471246 KCNG1Q9UIX4 513 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.04□□□□□ -2.08
UBXN4-207ENST00000471246 HDAC5Q9UQL6 1122 aa2.04□□□□□ -2.08
UBXN4-207ENST00000471246 AHRRA9YTQ3 701 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 PRR5-ARHGAP8B1AHC4 643 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 B5MCH6 92 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 LEFTY2O00292 366 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 FOXN1O15353 648 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 BRINP1O60477 761 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 RECQL4O94761 1208 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 ABHD16AO95870 558 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 ITGB1P05556 798 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 CDK4P11802 303 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 HSP90B1P14625 803 aaKnown RBP2.03□□□□□ -2.08
UBXN4-207ENST00000471246 CNGA1P29973 690 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 CRHR1P34998 444 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 MASP1P48740 699 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 PTTG1IPP53801 180 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 CDK17Q00537 523 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 APBA1Q02410 837 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 MUM1Q2TAK8 710 aa2.03□□□□□ -2.08
UBXN4-207ENST00000471246 C19orf54Q5BKX5 351 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms