RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 N4BP1O75113 896 aaKnown RBP10.07□□□□□ -0.8
SF3A1-206ENST00000471037 C1RP00736 705 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 P4HBP07237 508 aaKnown RBP10.07□□□□□ -0.8
SF3A1-206ENST00000471037 ADH1AP07327 375 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 GCFC2P16383 781 aaKnown RBP10.07□□□□□ -0.8
SF3A1-206ENST00000471037 KRT85P78386 507 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 DSC1Q08554 894 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 LAMTOR4Q0VGL1 99 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 INF2Q27J81 1249 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 ELMSAN1Q6PJG2 1045 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 PIK3AP1Q6ZUJ8 805 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 FRMD5Q7Z6J6 570 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 C4orf19Q8IY42 314 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 COLGALT2Q8IYK4 626 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
SF3A1-206ENST00000471037 SMG8Q8ND04 991 aaKnown RBP10.07□□□□□ -0.8
SF3A1-206ENST00000471037 FLCNQ8NFG4 579 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 TCP11Q8WWU5 503 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 CCDC51Q96ER9 411 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 CEP170P1Q96L14 293 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 FAM193BQ96PV7 902 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-206ENST00000471037 RPS6KC1Q96S38 1066 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 LXNQ9BS40 222 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 RXFP1Q9HBX9 757 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 WDR6Q9NNW5 1121 aaKnown RBP10.07□□□□□ -0.8
SF3A1-206ENST00000471037 MAN1C1Q9NR34 630 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 DPP7Q9UHL4 492 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 CFAP45Q9UL16 551 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 TEX28O15482 410 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 PI15O43692 258 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 BAG4O95429 457 aaKnown RBP10.06□□□□□ -0.8
SF3A1-206ENST00000471037 GLUD1P00367 558 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 POMCP01189 267 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 SSBP05455 408 aaKnown RBP eCLIP10.06□□□□□ -0.8
SF3A1-206ENST00000471037 SRGAP2CP0DJJ0 459 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 AXLP30530 894 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 YWHABP31946 246 aaKnown RBP10.06□□□□□ -0.8
SF3A1-206ENST00000471037 DSG1Q02413 1049 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 DNM1Q05193 864 aaKnown RBP10.06□□□□□ -0.8
SF3A1-206ENST00000471037 ORC2Q13416 577 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-206ENST00000471037 EMC2Q15006 297 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 EPHA7Q15375 998 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 KIAA0319Q5VV43 1072 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 FAM173BQ6P4H8 233 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 NEK8Q86SG6 692 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 IFNLR1Q8IU57 520 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-206ENST00000471037 GPR65Q8IYL9 337 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 SIX5Q8N196 739 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 RNF149Q8NC42 400 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 HDAC7Q8WUI4 952 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 STAMQ92783 540 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 HAS1Q92839 578 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 TMEM143Q96AN5 459 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 SCAND2PQ9GZW5 306 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-206ENST00000471037 EPS15L1Q9UBC2 864 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 WNT16Q9UBV4 365 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 FBXL21Q9UKT6 434 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 IPPQ9Y573 584 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 CLUHO75153 1309 aa10.06□□□□□ -0.8
SF3A1-206ENST00000471037 ZMYM2Q9UBW7 1377 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 CCDC195A0A1B0GUA6 201 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 FAM205CA6NFA0 338 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 ARL5CA6NH57 179 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 GOLGA6L22H0YM25 854 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 C2CD2LO14523 706 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 TSPAN1O60635 241 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 ERLIN2O94905 339 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 YEATS4O95619 227 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 BMP15O95972 392 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 ITGA4P13612 1032 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 MLH1P40692 756 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 GLUD2P49448 558 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 TOB1P50616 345 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-206ENST00000471037 PTENP60484 403 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 POU5F1BQ06416 359 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 SPIRE1Q08AE8 756 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 ANGPT1Q15389 498 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 FOXD4L6Q3SYB3 417 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-206ENST00000471037 EARS2Q5JPH6 523 aaKnown RBP10.05□□□□□ -0.8
SF3A1-206ENST00000471037 NOTUMQ6P988 496 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 FOXD4L3Q6VB84 417 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-206ENST00000471037 OTUD6AQ7L8S5 288 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 TAS1R1Q7RTX1 841 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 DTWD2Q8NBA8 298 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 NXPE3Q969Y0 559 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 ZNF707Q96C28 371 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-206ENST00000471037 USP28Q96RU2 1077 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 NAP1L4Q99733 375 aaKnown RBP10.05□□□□□ -0.8
SF3A1-206ENST00000471037 EIF2AQ9BY44 585 aaKnown RBP10.05□□□□□ -0.8
SF3A1-206ENST00000471037 PLEKHA4Q9H4M7 779 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 XPNPEP1Q9NQW7 623 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 CHST7Q9NS84 486 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 PRG3Q9Y2Y8 225 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-206ENST00000471037 ARID2Q68CP9 1835 aa10.05□□□□□ -0.8
SF3A1-206ENST00000471037 RIF1Q5UIP0 2472 aaKnown RBP10.05□□□□□ -0.8
SF3A1-206ENST00000471037 FAM186AA6NE01 2351 aa10.04□□□□□ -0.8
SF3A1-206ENST00000471037 PTPRZ1P23471 2315 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-206ENST00000471037 NARSO43776 548 aaKnown RBP10.04□□□□□ -0.8
SF3A1-206ENST00000471037 CCNT1O60563 726 aaKnown RBP10.04□□□□□ -0.8
SF3A1-206ENST00000471037 NR1I2O75469 434 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms