RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 FAM126AQ9BYI3 521 aaPredicted RBP5.57□□□□□ -1.52
COL9A1-206ENST00000470652 C14orf119Q9NWQ9 140 aa5.57□□□□□ -1.52
COL9A1-206ENST00000470652 AURKAIP1Q9NWT8 199 aaPredicted RBP5.57□□□□□ -1.52
COL9A1-206ENST00000470652 MAPKBP1O60336 1514 aa5.57□□□□□ -1.52
COL9A1-206ENST00000470652 EHBP1L1Q8N3D4 1523 aa5.57□□□□□ -1.52
COL9A1-206ENST00000470652 NCOA2Q15596 1464 aa5.57□□□□□ -1.52
COL9A1-206ENST00000470652 ABCC10Q5T3U5 1492 aa5.57□□□□□ -1.52
COL9A1-206ENST00000470652 SUPT6HQ7KZ85 1726 aaKnown RBP5.57□□□□□ -1.52
COL9A1-206ENST00000470652 TROQ12816 1431 aaPredicted RBP5.57□□□□□ -1.52
COL9A1-206ENST00000470652 CAPN14A8MX76 684 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 FZD7O75084 574 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 PRKD3O94806 890 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 KRTAP1-1Q07627 177 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 UBE3CQ15386 1083 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 C19orf54Q5BKX5 351 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 SPDYAQ5MJ70 313 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 SPTY2D1Q68D10 685 aaPredicted RBP5.56□□□□□ -1.52
COL9A1-206ENST00000470652 CRIP3Q6Q6R5 217 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 GSPT2Q8IYD1 628 aaKnown RBP5.56□□□□□ -1.52
COL9A1-206ENST00000470652 MIEF2Q96C03 454 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 ZNF512Q96ME7 567 aaPredicted RBP5.56□□□□□ -1.52
COL9A1-206ENST00000470652 PUS7LQ9H0K6 701 aaKnown RBP5.56□□□□□ -1.52
COL9A1-206ENST00000470652 SLITRK6Q9H5Y7 841 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 DPP7Q9UHL4 492 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 EDARQ9UNE0 448 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 GIT1Q9Y2X7 761 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 MYO5CQ9NQX4 1742 aa5.56□□□□□ -1.52
COL9A1-206ENST00000470652 MTUS2Q5JR59 1369 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 ZNF644Q9H582 1327 aaPredicted RBP5.55□□□□□ -1.52
COL9A1-206ENST00000470652 K7ESF4 209 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 MFAP3LO75121 409 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 AMHP03971 560 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 DUSP2Q05923 314 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 ELAVL1Q15717 326 aaKnown RBP5.55□□□□□ -1.52
COL9A1-206ENST00000470652 USP39Q53GS9 565 aaKnown RBP5.55□□□□□ -1.52
COL9A1-206ENST00000470652 ZNF662Q6ZS27 426 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 USP51Q70EK9 711 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 NECAB2Q7Z6G3 386 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 MSL3Q8N5Y2 521 aaKnown RBP5.55□□□□□ -1.52
COL9A1-206ENST00000470652 OR5M3Q8NGP4 307 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 COG1Q8WTW3 980 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 TGFBRAP1Q8WUH2 860 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 SNX33Q8WV41 574 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 AUTS2Q8WXX7 1259 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 ENKD1Q9H0I2 346 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 SLC5A4Q9NY91 659 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 HECAQ9UBI9 543 aaPredicted RBP5.55□□□□□ -1.52
COL9A1-206ENST00000470652 ABCA9Q8IUA7 1624 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 MAP3K4Q9Y6R4 1608 aa5.55□□□□□ -1.52
COL9A1-206ENST00000470652 WASHC2AQ641Q2 1341 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 PRAMEF4O60810 478 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 IPO13O94829 963 aaKnown RBP5.54□□□□□ -1.52
COL9A1-206ENST00000470652 GYPEP15421 78 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 GNAT2P19087 354 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 ACRV1P26436 265 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 CASRP41180 1078 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 GPR3P46089 330 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 CDK17Q00537 523 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 MUM1Q2TAK8 710 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 ANO4Q32M45 955 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 GJC2Q5T442 439 aaPredicted RBP5.54□□□□□ -1.52
COL9A1-206ENST00000470652 KCNK18Q7Z418 384 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 FATE1Q969F0 183 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 ZNF747Q9BV97 191 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 QRSL1Q9H0R6 528 aaKnown RBP5.54□□□□□ -1.52
COL9A1-206ENST00000470652 PREX2Q70Z35 1606 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 SAMD9LQ8IVG5 1584 aa5.54□□□□□ -1.52
COL9A1-206ENST00000470652 MAP3K1Q13233 1512 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 GPATCH8Q9UKJ3 1502 aaKnown RBP5.53□□□□□ -1.52
COL9A1-206ENST00000470652 RPTORQ8N122 1335 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 PLEKHD1A6NEE1 506 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 HOXA3O43365 443 aaPredicted RBP5.53□□□□□ -1.52
COL9A1-206ENST00000470652 PHF2O75151 1096 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 TMEM127O75204 238 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 GASTP01350 101 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 CTSSP25774 331 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 CANXP27824 592 aaKnown RBP5.53□□□□□ -1.52
COL9A1-206ENST00000470652 ERVK-21P61565 698 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 NRN1LQ496H8 165 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 FAM180AQ6UWF9 173 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 BTNL9Q6UXG8 535 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 ABHD15Q6UXT9 468 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 RNF207Q6ZRF8 634 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 APBB1IPQ7Z5R6 666 aaPredicted RBP5.53□□□□□ -1.52
COL9A1-206ENST00000470652 C1orf210Q8IVY1 113 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 GLB1L3Q8NCI6 653 aaPredicted RBP5.53□□□□□ -1.52
COL9A1-206ENST00000470652 EXTL1Q92935 676 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 IL17RAQ96F46 866 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 VPS11Q9H270 941 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 EPC1Q9H2F5 836 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 IFT122Q9HBG6 1241 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 ARHGEF12Q9NZN5 1544 aa5.53□□□□□ -1.52
COL9A1-206ENST00000470652 PTPN23Q9H3S7 1636 aa5.52□□□□□ -1.53
COL9A1-206ENST00000470652 PLSCR1O15162 318 aa5.52□□□□□ -1.53
COL9A1-206ENST00000470652 CDK11BP21127 795 aaKnown RBP5.52□□□□□ -1.53
COL9A1-206ENST00000470652 GZMKP49863 264 aa5.52□□□□□ -1.53
COL9A1-206ENST00000470652 SLC5A3P53794 718 aa5.52□□□□□ -1.53
COL9A1-206ENST00000470652 CRHR2Q13324 411 aa5.52□□□□□ -1.53
COL9A1-206ENST00000470652 KLF1Q13351 362 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms