RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 NSMCE1Q8WV22 266 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 GRIN3BO60391 1043 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 BBOX1O75936 387 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 GJB6O95452 261 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 ANP32DO95626 131 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 PAX7P23759 505 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 FMO1Q01740 532 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 TCP10Q12799 353 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 PNMA8AQ86V59 439 aaPredicted RBP11.05□□□□□ -0.64
SMC4-210ENST00000469762 SLC47A2Q86VL8 602 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 FAM178BQ8IXR5 827 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 KIF2BQ8N4N8 673 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 MAB21L3Q8N8X9 362 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 SLC5A5Q92911 643 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 CCDC17Q96LX7 622 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 LRRC19Q9H756 370 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 ARHGEF3Q9NR81 526 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 RASAL2Q9UJF2 1139 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 USP15Q9Y4E8 981 aaPredicted RBP11.05□□□□□ -0.64
SMC4-210ENST00000469762 SLX4Q8IY92 1834 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 THSD7AQ9UPZ6 1657 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 PIK3CDO00329 1044 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 KIF1CO43896 1103 aaKnown RBP11.05□□□□□ -0.64
SMC4-210ENST00000469762 EZRP15311 586 aaKnown RBP11.05□□□□□ -0.64
SMC4-210ENST00000469762 MYO1EQ12965 1108 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 SEPT14Q6ZU15 432 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 CYFIP1Q7L576 1253 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 MGARPQ8TDB4 240 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 ZNF526Q8TF50 670 aaPredicted RBP11.05□□□□□ -0.64
SMC4-210ENST00000469762 C7orf43Q8WVR3 580 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 UTP4Q969X6 686 aaKnown RBP11.05□□□□□ -0.64
SMC4-210ENST00000469762 ELMO3Q96BJ8 720 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 PCIF1Q9H4Z3 704 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.05□□□□□ -0.641e-6■■■■■ 397.5
SMC4-210ENST00000469762 SAMD15Q9P1V8 674 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 SUGT1Q9Y2Z0 365 aa11.05□□□□□ -0.64
SMC4-210ENST00000469762 IGF2BP3O00425 579 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMC4-210ENST00000469762 ACSL3O95573 720 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 FOSP01100 380 aaPredicted RBP11.04□□□□□ -0.64
SMC4-210ENST00000469762 SERPINB2P05120 415 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 HSPA6P17066 643 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 ODR4Q5SWX8 454 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 FAM71AQ8IYT1 594 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 SLCO2A1Q92959 643 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 THOC1Q96FV9 657 aaKnown RBP11.04□□□□□ -0.64
SMC4-210ENST00000469762 RBM17Q96I25 401 aaKnown RBP11.04□□□□□ -0.64
SMC4-210ENST00000469762 CBWD1Q9BRT8 395 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 ECT2Q9H8V3 914 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 CHST7Q9NS84 486 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 EURLQ9NYK6 297 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 FRMD4BQ9Y2L6 1034 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 C15orf41Q9Y2V0 281 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 NEU2Q9Y3R4 380 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 SCN9AQ15858 1988 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 UBE4BO95155 1302 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 KLRG2A4D1S0 409 aaPredicted RBP11.04□□□□□ -0.64
SMC4-210ENST00000469762 GGPS1O95749 300 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 CYP1A2P05177 515 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 GCLMP48507 274 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 PDE6CP51160 858 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 SLMAPQ14BN4 828 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 CERKLQ49MI3 558 aaPredicted RBP11.04□□□□□ -0.64
SMC4-210ENST00000469762 UBL4BQ8N7F7 174 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 C1orf54Q8WWF1 131 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 CKAP2Q8WWK9 683 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 SEMA4DQ92854 862 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 ARHGEF2Q92974 986 aaKnown RBP11.04□□□□□ -0.64
SMC4-210ENST00000469762 TRIM7Q9C029 511 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 COA1Q9GZY4 146 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 WNT8AQ9H1J5 351 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 UNC45AQ9H3U1 944 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 CFAP73A6NFT4 308 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 CLDN3O15551 220 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 GDF11O95390 407 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 DLATP10515 647 aaKnown RBP11.04□□□□□ -0.64
SMC4-210ENST00000469762 UBXN2AP68543 259 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 HHIPL2Q6UWX4 724 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 EP400NLQ6ZTU2 488 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 CCDC105Q8IYK2 499 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 GMCL1P1Q8NEA9 526 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 GMCL1Q96IK5 515 aa11.04□□□□□ -0.64
SMC4-210ENST00000469762 ROPN1BQ9BZX4 212 aaPredicted RBP11.04□□□□□ -0.64
SMC4-210ENST00000469762 ROPN1Q9HAT0 212 aaPredicted RBP11.04□□□□□ -0.64
SMC4-210ENST00000469762 FSCN2O14926 492 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 EXOC3O60645 756 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 HIP1RO75146 1068 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 CALCAP01258 141 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 ARP10275 920 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 CRYMQ14894 314 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 LRCH2Q5VUJ6 765 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 CCDC25Q86WR0 208 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 TEX2Q8IWB9 1127 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 ATG4AQ8WYN0 398 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 DDX1Q92499 740 aaKnown RBP11.03□□□□□ -0.64
SMC4-210ENST00000469762 DNAJC17Q9NVM6 304 aaKnown RBP11.03□□□□□ -0.64
SMC4-210ENST00000469762 SEL1LQ9UBV2 794 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 MTRF1LQ9UGC7 380 aaKnown RBP11.03□□□□□ -0.64
SMC4-210ENST00000469762 TNIP1Q15025 636 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms