RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 GJB6O95452 261 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 ANGEL2Q5VTE6 544 aaKnown RBP19.19■□□□□ 0.66
MCF2L-221ENST00000469415 FBXO25Q8TCJ0 367 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 SYT11Q9BT88 431 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 KIAA1683Q9H0B3 1180 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 TRPC6Q9Y210 931 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 CCDC105Q8IYK2 499 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 PARD3BQ8TEW8 1205 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 PICK1Q9NRD5 415 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 GOLGA6L10A0A0M3HER8 536 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 LRRIQ4A6NIV6 560 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 SHBGP04278 402 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 WNT7BP56706 349 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 GTF2BQ00403 316 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 ZNF844Q08AG5 666 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 SF3B2Q13435 895 aaKnown RBP19.19■□□□□ 0.66
MCF2L-221ENST00000469415 KIF22Q14807 665 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 SLC39A4Q6P5W5 647 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 MICALL1Q8N3F8 863 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 ZNF564Q8TBZ8 553 aaPredicted RBP19.19■□□□□ 0.66
MCF2L-221ENST00000469415 HEMGNQ9BXL5 484 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 USTQ9Y2C2 406 aa19.19■□□□□ 0.66
MCF2L-221ENST00000469415 MYO1FO00160 1098 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 CNTN2Q02246 1040 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 KRT39Q6A163 491 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 ATG4AQ8WYN0 398 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 FMO2Q99518 471 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 MOV10L1Q9BXT6 1211 aaKnown RBP19.18■□□□□ 0.66
MCF2L-221ENST00000469415 RASSF4Q9H2L5 321 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 PFASO15067 1338 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 CLDN3O15551 220 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 CYP11B1P15538 503 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 MAGOHP61326 146 aaKnown RBP19.18■□□□□ 0.66
MCF2L-221ENST00000469415 DALRD3Q5D0E6 543 aaKnown RBP19.18■□□□□ 0.66
MCF2L-221ENST00000469415 ZBTB41Q5SVQ8 909 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 LPAR1Q92633 364 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 NT5C1BQ96P26 610 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 RPTORQ8N122 1335 aa19.18■□□□□ 0.66
MCF2L-221ENST00000469415 A0A0A6YYK5 440 aaPredicted RBP19.17■□□□□ 0.66
MCF2L-221ENST00000469415 CCDC188H7C350 402 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 RGS20O76081 388 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 CFHP08603 1231 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 FGFR4P22455 802 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 LSP1P33241 339 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 HSPA9P38646 679 aaKnown RBP19.17■□□□□ 0.66
MCF2L-221ENST00000469415 FMO1Q01740 532 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 JAMLQ86YT9 394 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 SLC9A9Q8IVB4 645 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 NEK9Q8TD19 979 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 LRRC45Q96CN5 670 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 RAB20Q9NX57 234 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 TNFRSF8P28908 595 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 PRKCEQ02156 737 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 ZNF394Q53GI3 561 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 RNF187Q5TA31 235 aaPredicted RBP19.17■□□□□ 0.66
MCF2L-221ENST00000469415 C4orf19Q8IY42 314 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 POLR3FQ9H1D9 316 aaPredicted RBP19.17■□□□□ 0.66
MCF2L-221ENST00000469415 KLHL11Q9NVR0 708 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 CNOT8Q9UFF9 292 aaKnown RBP19.17■□□□□ 0.66
MCF2L-221ENST00000469415 DBR1Q9UK59 544 aaKnown RBP19.17■□□□□ 0.66
MCF2L-221ENST00000469415 PDE6CP51160 858 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 MFAP3P55082 362 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 CUL1Q13616 776 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 TTC27Q6P3X3 843 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 CDR2LQ86X02 465 aaPredicted RBP19.17■□□□□ 0.66
MCF2L-221ENST00000469415 FBXL13Q8NEE6 735 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 CNKSR2Q8WXI2 1034 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 INTUQ9ULD6 942 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 SYNPO2Q9UMS6 1093 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 FAM169AQ9Y6X4 670 aa19.17■□□□□ 0.66
MCF2L-221ENST00000469415 ECM2O94769 699 aaPredicted RBP19.16■□□□□ 0.66
MCF2L-221ENST00000469415 MARK3P27448 753 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 LIG4P49917 911 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 TNFAIP1Q13829 316 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 TMEM132BQ14DG7 1078 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 CCDC38Q502W7 563 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 RASGEF1CQ8N431 466 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 UBL4BQ8N7F7 174 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 ANAPC7Q9UJX3 599 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 UBE4BO95155 1302 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 FOXO6A8MYZ6 492 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 NFKBIEO00221 500 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 TULP2O00295 520 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 O00370 1275 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 CTNND1O60716 968 aaKnown RBP19.16■□□□□ 0.66
MCF2L-221ENST00000469415 BACE1P56817 501 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 KRT76Q01546 638 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 CCDC137Q6PK04 289 aaKnown RBP19.16■□□□□ 0.66
MCF2L-221ENST00000469415 TMC3Q7Z5M5 1100 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 PRUNE1Q86TP1 453 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 PRELID2Q8N945 189 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 CALR3Q96L12 384 aaKnown RBP19.16■□□□□ 0.66
MCF2L-221ENST00000469415 FNBP1Q96RU3 617 aa19.16■□□□□ 0.66
MCF2L-221ENST00000469415 CCND2P30279 289 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 POLGP54098 1239 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-221ENST00000469415 ACTR2P61160 394 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 SP2Q02086 613 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 ADCY1Q08828 1119 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 FAM182AQ5T1J6 154 aa19.15■□□□□ 0.66
MCF2L-221ENST00000469415 SEL1L2Q5TEA6 688 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms