RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ENOSF1Q7L5Y1 443 aa10.12□□□□□ -0.79
SMC1A-205ENST00000469129 IFNL1Q8IU54 200 aa10.12□□□□□ -0.79
SMC1A-205ENST00000469129 PRPF31Q8WWY3 499 aaKnown RBP10.12□□□□□ -0.79
SMC1A-205ENST00000469129 NT5C1BQ96P26 610 aa10.12□□□□□ -0.79
SMC1A-205ENST00000469129 MAP7D2Q96T17 732 aa10.12□□□□□ -0.79
SMC1A-205ENST00000469129 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMC1A-205ENST00000469129 TMEM117Q9H0C3 514 aa10.12□□□□□ -0.79
SMC1A-205ENST00000469129 CCDC113Q9H0I3 377 aa10.12□□□□□ -0.79
SMC1A-205ENST00000469129 SUGCTQ9HAC7 445 aa10.12□□□□□ -0.79
SMC1A-205ENST00000469129 WBP1LQ9NX94 342 aa10.12□□□□□ -0.79
SMC1A-205ENST00000469129 ANKFY1Q9P2R3 1169 aa10.12□□□□□ -0.79
SMC1A-205ENST00000469129 SUCLA2Q9P2R7 463 aaPredicted RBP10.12□□□□□ -0.79
SMC1A-205ENST00000469129 COQ4Q9Y3A0 265 aa10.12□□□□□ -0.79
SMC1A-205ENST00000469129 MRFAP1Q9Y605 127 aa10.12□□□□□ -0.79
SMC1A-205ENST00000469129 RRN3P2A6NIE6 340 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 BTNL10A8MVZ5 291 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 ZBTB42B2RXF5 422 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 ZNF263O14978 683 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 CLDN3O15551 220 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 ZEB2O60315 1214 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 EVI5O60447 810 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 TOM1L1O75674 476 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 TUBB4BP68371 445 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 DLG4P78352 724 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 CYP27A1Q02318 531 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 APBA1Q02410 837 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 TNFAIP2Q03169 654 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 GFPT1Q06210 699 aaPredicted RBP10.11□□□□□ -0.79
SMC1A-205ENST00000469129 KIF22Q14807 665 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 DRAP1Q14919 205 aaPredicted RBP10.11□□□□□ -0.79
SMC1A-205ENST00000469129 WHAMMP3Q1A5X7 153 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 C1orf220Q5T0J3 134 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 EFCAB12Q6NXP0 572 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 C17orf99Q6UX52 265 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 IRF2BP2Q7Z5L9 587 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 RHPN2Q8IUC4 686 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 LRRC71Q8N4P6 559 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 RNF10Q8N5U6 811 aaKnown RBP10.11□□□□□ -0.79
SMC1A-205ENST00000469129 CEP112Q8N8E3 955 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 RNF149Q8NC42 400 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 LMO3Q8TAP4 145 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 NPLOC4Q8TAT6 608 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 AFG1LQ8WV93 481 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 CCDC127Q96BQ5 260 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 NOX5Q96PH1 765 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 ZIC5Q96T25 663 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 CGRRF1Q99675 332 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 FAM213AQ9BRX8 229 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 C1orf112Q9NSG2 853 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 PRMT7Q9NVM4 692 aaPredicted RBP10.11□□□□□ -0.79
SMC1A-205ENST00000469129 RBAKQ9NYW8 714 aaPredicted RBP10.11□□□□□ -0.79
SMC1A-205ENST00000469129 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 CDC23Q9UJX2 597 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 INTUQ9ULD6 942 aa10.11□□□□□ -0.79
SMC1A-205ENST00000469129 A0A0B4J269 797 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 MACROD2A1Z1Q3 448 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 H3BRB1 525 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 TNPO2O14787 897 aaKnown RBP10.1□□□□□ -0.79
SMC1A-205ENST00000469129 OGTO15294 1046 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 MSCO60682 206 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 ALDH1A1P00352 501 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 ZNF286BP0CG31 522 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 DLATP10515 647 aaKnown RBP10.1□□□□□ -0.79
SMC1A-205ENST00000469129 INSRRP14616 1297 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 SMPD1P17405 629 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 TNNI1P19237 187 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 CTCFP49711 727 aaPredicted RBP10.1□□□□□ -0.79
SMC1A-205ENST00000469129 CPT1AP50416 773 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 PTENP60484 403 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 CLDN10P78369 228 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 CDC42EP1Q00587 391 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 PTK2Q05397 1052 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 CKAP4Q07065 602 aaKnown RBP10.1□□□□□ -0.79
SMC1A-205ENST00000469129 PPFIA1Q13136 1202 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 NAB2Q15742 525 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 KYAT1Q16773 422 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 FAM187BQ17R55 369 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 TMEM132AQ24JP5 1023 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 MPZL3Q6UWV2 235 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 APBB1IPQ7Z5R6 666 aaPredicted RBP10.1□□□□□ -0.79
SMC1A-205ENST00000469129 MTERF4Q7Z6M4 381 aaKnown RBP10.1□□□□□ -0.79
SMC1A-205ENST00000469129 IFNLR1Q8IU57 520 aaPredicted RBP10.1□□□□□ -0.79
SMC1A-205ENST00000469129 BRSK2Q8IWQ3 736 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 METTL13Q8N6R0 699 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 PLEKHO2Q8TD55 490 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 TARS2Q9BW92 718 aaKnown RBP10.1□□□□□ -0.79
SMC1A-205ENST00000469129 IRX2Q9BZI1 471 aaPredicted RBP10.1□□□□□ -0.79
SMC1A-205ENST00000469129 IMPG2Q9BZV3 1241 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 TUT1Q9H6E5 874 aaKnown RBP10.1□□□□□ -0.79
SMC1A-205ENST00000469129 UBE2TQ9NPD8 197 aaPredicted RBP10.1□□□□□ -0.79
SMC1A-205ENST00000469129 Q9Y3F1 56 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 FRMPD3Q5JV73 1810 aa10.1□□□□□ -0.79
SMC1A-205ENST00000469129 CNTNAP2Q9UHC6 1331 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 A0A087X0T9 212 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 A0A0A6YYK5 440 aaPredicted RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 A0A0U1RQJ8 604 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 EFCAB8A8MWE9 144 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 INO80B-WBP1J3KQ70 363 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms