RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 C1orf228Q6PIY5 440 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 MCRS1Q96EZ8 462 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 SCLT1Q96NL6 688 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 SDF4Q9BRK5 362 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 RNF41Q9H4P4 317 aaPredicted RBP13.25□□□□□ -0.29
VPS26A-204ENST00000467852 CLMPQ9H6B4 373 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 TRPV5Q9NQA5 729 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 GDE1Q9NZC3 331 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 FNIP2Q9P278 1114 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 RAXQ9Y2V3 346 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 NOTCH4Q99466 2003 aa13.25□□□□□ -0.29
VPS26A-204ENST00000467852 PDCD11Q14690 1871 aaKnown RBP13.25□□□□□ -0.29
VPS26A-204ENST00000467852 SPAARA0A1B0GVQ0 90 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 CDX4O14627 284 aaPredicted RBP13.24□□□□□ -0.29
VPS26A-204ENST00000467852 BACH1O14867 736 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 CCL16O15467 120 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 RHOBTB1O94844 696 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 C22orf31O95567 290 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 RLBP1P12271 317 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 FGFR4P22455 802 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 TMOD1P28289 359 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 HAND2P61296 217 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 CREMQ03060 361 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 GRM2Q14416 872 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 ELF2Q15723 593 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 PLK5Q496M5 336 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 PABPC1LQ4VXU2 614 aaKnown RBP13.24□□□□□ -0.29
VPS26A-204ENST00000467852 DGKKQ5KSL6 1271 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 ING5Q8WYH8 240 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 PGBD4Q96DM1 585 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 PIGSQ96S52 555 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 TRAIPQ9BWF2 469 aa13.24□□□□□ -0.29
VPS26A-204ENST00000467852 ZNF334Q9HCZ1 680 aaPredicted RBP13.24□□□□□ -0.29
VPS26A-204ENST00000467852 RBM12Q9NTZ6 932 aaKnown RBP13.24□□□□□ -0.29
VPS26A-204ENST00000467852 PRG3Q9Y2Y8 225 aaPredicted RBP13.24□□□□□ -0.29
VPS26A-204ENST00000467852 MRPS23Q9Y3D9 190 aaKnown RBP13.24□□□□□ -0.29
VPS26A-204ENST00000467852 EML5Q05BV3 1969 aa13.23□□□□□ -0.29
VPS26A-204ENST00000467852 PNMA6FA0A0J9YX94 578 aa13.23□□□□□ -0.29
VPS26A-204ENST00000467852 ATXN7O15265 892 aaPredicted RBP13.23□□□□□ -0.29
VPS26A-204ENST00000467852 SMARCA5O60264 1052 aaPredicted RBP13.23□□□□□ -0.29
VPS26A-204ENST00000467852 DARSP14868 501 aaKnown RBP13.23□□□□□ -0.29
VPS26A-204ENST00000467852 RAB27AP51159 221 aa13.23□□□□□ -0.29
VPS26A-204ENST00000467852 TSHZ3Q63HK5 1081 aa13.23□□□□□ -0.29
VPS26A-204ENST00000467852 USP17L6PQ6QN14 398 aa13.23□□□□□ -0.29
VPS26A-204ENST00000467852 GPR65Q8IYL9 337 aa13.23□□□□□ -0.29
VPS26A-204ENST00000467852 MBOAT7Q96N66 472 aa13.23□□□□□ -0.29
VPS26A-204ENST00000467852 ZFP14Q9HCL3 533 aa13.23□□□□□ -0.29
VPS26A-204ENST00000467852 JADE2Q9NQC1 790 aa13.23□□□□□ -0.29
VPS26A-204ENST00000467852 UBIAD1Q9Y5Z9 338 aa13.23□□□□□ -0.29
VPS26A-204ENST00000467852 BCLAF3A2AJT9 711 aaKnown RBP13.22□□□□□ -0.29
VPS26A-204ENST00000467852 MEIS3P2A8K0S8 358 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 ZBTB42B2RXF5 422 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 MAGEB2O15479 319 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 ZNF623O75123 536 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 ATG7O95352 703 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 C8AP07357 584 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 GDI1P31150 447 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 HOXA9P31269 272 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 OR1G1P47890 313 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 PXNP49023 591 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-204ENST00000467852 NT5C2P49902 561 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 CLCN3P51790 818 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 ZNF423Q2M1K9 1284 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 PDXDC2PQ6P474 469 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 Q6ZS52 159 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 CKAP2LQ8IYA6 745 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 RNF168Q8IYW5 571 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-204ENST00000467852 ZNF843Q8N446 348 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 LSM14AQ8ND56 463 aaKnown RBP13.22□□□□□ -0.29
VPS26A-204ENST00000467852 MSANTD3Q96H12 275 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 ZNF668Q96K58 619 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-204ENST00000467852 ZSCAN10Q96SZ4 725 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-204ENST00000467852 CHST7Q9NS84 486 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 FAM105AQ9NUU6 356 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 C2orf42Q9NWW7 574 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 MARCH5Q9NX47 278 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 FBXW11Q9UKB1 542 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 CFAP46Q8IYW2 2715 aa13.22□□□□□ -0.29
VPS26A-204ENST00000467852 NFASCO94856 1347 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 CAPN8A6NHC0 703 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 NTRK1P04629 796 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 RPL17P18621 184 aaKnown RBP13.21□□□□□ -0.29
VPS26A-204ENST00000467852 HOXC13P31276 330 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 MLLT6P55198 1093 aaPredicted RBP13.21□□□□□ -0.29
VPS26A-204ENST00000467852 USP41Q3LFD5 358 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 EFCAB12Q6NXP0 572 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 RAB44Q7Z6P3 723 aaPredicted RBP13.21□□□□□ -0.29
VPS26A-204ENST00000467852 MAP4K3Q8IVH8 894 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 SIRT2Q8IXJ6 389 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 TMEFF1Q8IYR6 380 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 ENAHQ8N8S7 591 aaPredicted RBP13.21□□□□□ -0.29
VPS26A-204ENST00000467852 MDM1Q8TC05 714 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 APOL6Q9BWW8 343 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 DUSP15Q9H1R2 295 aaPredicted RBP13.21□□□□□ -0.29
VPS26A-204ENST00000467852 RIOX1Q9H6W3 641 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 ZNF302Q9NR11 478 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 DNMT3BQ9UBC3 853 aaKnown RBP13.21□□□□□ -0.29
VPS26A-204ENST00000467852 MAD2L2Q9UI95 211 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.29
VPS26A-204ENST00000467852 COL4A2P08572 1712 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms