RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 PCMTD1Q96MG8 357 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-206ENST00000466742 DDX23Q9BUQ8 820 aaKnown RBP16.62■□□□□ 0.25
ABCF3-206ENST00000466742 TUBGCP4Q9UGJ1 667 aa16.62■□□□□ 0.25
ABCF3-206ENST00000466742 RBAK-RBAKDNI3L0D1 243 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 BMP3P12645 472 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 CBX3Q13185 183 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 RCN2Q14257 317 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 CNGA2Q16280 664 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 RASIP1Q5U651 963 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 RNF43Q68DV7 783 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 BTNL9Q6UXG8 535 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 REXO1Q8N1G1 1221 aaKnown RBP16.61■□□□□ 0.25
ABCF3-206ENST00000466742 COA7Q96BR5 231 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 PCDH18Q9HCL0 1135 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 HACL1Q9UJ83 578 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 MYH4Q9Y623 1939 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 CETN3O15182 167 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 DAPK3O43293 454 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 ATP9AO75110 1047 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 AFPP02771 609 aaKnown RBP16.61■□□□□ 0.25
ABCF3-206ENST00000466742 ASNSP08243 561 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 ADCY7P51828 1080 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 RNASE9P60153 205 aaKnown RBP16.61■□□□□ 0.25
ABCF3-206ENST00000466742 ARL6IP4Q66PJ3 421 aaKnown RBP16.61■□□□□ 0.25
ABCF3-206ENST00000466742 PPP1R12CQ9BZL4 782 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 MIS12Q9H081 205 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 DPH5Q9H2P9 285 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 DCLRE1BQ9H816 532 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 USP20Q9Y2K6 914 aa16.61■□□□□ 0.25
ABCF3-206ENST00000466742 GNA14O95837 355 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 FTCDO95954 541 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 MCM7P33993 719 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 ECE1P42892 770 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 NONOQ15233 471 aaKnown RBP eCLIP16.6■□□□□ 0.25
ABCF3-206ENST00000466742 NAB2Q15742 525 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 INF2Q27J81 1249 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 MIIPQ5JXC2 388 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 TTI2Q6NXR4 508 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 CROCCP2Q86T23 111 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 C4orf32Q8N8J7 132 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 ACTRT1Q8TDG2 376 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 ACER1Q8TDN7 264 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 TRIM47Q96LD4 638 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 DEFB129Q9H1M3 183 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 RIC8AQ9NPQ8 531 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 GINM1Q9NU53 330 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 GPRC5DQ9NZD1 345 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 STOML1Q9UBI4 398 aa16.6■□□□□ 0.25
ABCF3-206ENST00000466742 SSU72P8A0A1W2PR75 194 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 TPD52L2O43399 206 aaKnown RBP16.59■□□□□ 0.25
ABCF3-206ENST00000466742 PHEXP78562 749 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 GSTA3Q16772 222 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 QRICH1Q2TAL8 776 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 INPP5DQ92835 1189 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 HIC2Q96JB3 615 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 SYT17Q9BSW7 474 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 EPB41L4BQ9H329 900 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 FGFR1OP2Q9NVK5 253 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 RHBDL2Q9NX52 303 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 SPATA7Q9P0W8 599 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 LARSQ9P2J5 1176 aaKnown RBP16.59■□□□□ 0.25
ABCF3-206ENST00000466742 ASTN2O75129 1339 aaPredicted RBP16.59■□□□□ 0.25
ABCF3-206ENST00000466742 CCDC188H7C350 402 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 YY1P25490 414 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 IFNAR2P48551 515 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 SULT2A1Q06520 285 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 EHHADHQ08426 723 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 KPNB1Q14974 876 aaKnown RBP16.59■□□□□ 0.25
ABCF3-206ENST00000466742 C6orf118Q5T5N4 469 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 GLT8D2Q9H1C3 349 aa16.59■□□□□ 0.25
ABCF3-206ENST00000466742 LAD1O00515 517 aa16.58■□□□□ 0.25
ABCF3-206ENST00000466742 RGS16O15492 202 aaPredicted RBP16.58■□□□□ 0.25
ABCF3-206ENST00000466742 CYP1A1P04798 512 aaPredicted RBP16.58■□□□□ 0.25
ABCF3-206ENST00000466742 IFI35P80217 286 aaPredicted RBP16.58■□□□□ 0.25
ABCF3-206ENST00000466742 ORC2Q13416 577 aaPredicted RBP16.58■□□□□ 0.25
ABCF3-206ENST00000466742 ACVR2BQ13705 512 aa16.58■□□□□ 0.25
ABCF3-206ENST00000466742 BTG3Q14201 252 aaPredicted RBP16.58■□□□□ 0.25
ABCF3-206ENST00000466742 TNFAIP8L3Q5GJ75 292 aa16.58■□□□□ 0.25
ABCF3-206ENST00000466742 SYDE2Q5VT97 1194 aa16.58■□□□□ 0.25
ABCF3-206ENST00000466742 ANKLE1Q8NAG6 615 aa16.58■□□□□ 0.25
ABCF3-206ENST00000466742 HSFX1Q9UBD0 423 aa16.58■□□□□ 0.25
ABCF3-206ENST00000466742 PAIP2BQ9ULR5 123 aaKnown RBP16.58■□□□□ 0.25
ABCF3-206ENST00000466742 GFPT1Q06210 699 aaPredicted RBP16.58■□□□□ 0.24
ABCF3-206ENST00000466742 APOBEC3FQ8IUX4 373 aaKnown RBP16.58■□□□□ 0.24
ABCF3-206ENST00000466742 TAF4BQ92750 862 aa16.58■□□□□ 0.24
ABCF3-206ENST00000466742 DDX27Q96GQ7 796 aaKnown RBP16.58■□□□□ 0.24
ABCF3-206ENST00000466742 NR1H4Q96RI1 486 aaPredicted RBP16.58■□□□□ 0.24
ABCF3-206ENST00000466742 DUSP9Q99956 384 aaKnown RBP16.58■□□□□ 0.24
ABCF3-206ENST00000466742 SLITRK6Q9H5Y7 841 aa16.58■□□□□ 0.24
ABCF3-206ENST00000466742 AZI2Q9H6S1 392 aa16.58■□□□□ 0.24
ABCF3-206ENST00000466742 SCAF8Q9UPN6 1271 aaKnown RBP16.58■□□□□ 0.24
ABCF3-206ENST00000466742 ATP8A1Q9Y2Q0 1164 aa16.58■□□□□ 0.24
ABCF3-206ENST00000466742 TCP11X1B4DZS4 312 aa16.57■□□□□ 0.24
ABCF3-206ENST00000466742 PSMA7O14818 248 aa16.57■□□□□ 0.24
ABCF3-206ENST00000466742 HNRNPRO43390 633 aaKnown RBP16.57■□□□□ 0.24
ABCF3-206ENST00000466742 ASLP04424 464 aa16.57■□□□□ 0.24
ABCF3-206ENST00000466742 DNA2P51530 1060 aa16.57■□□□□ 0.24
ABCF3-206ENST00000466742 NEK8Q86SG6 692 aa16.57■□□□□ 0.24
ABCF3-206ENST00000466742 RMDN2Q96LZ7 410 aa16.57■□□□□ 0.24
ABCF3-206ENST00000466742 TMEM109Q9BVC6 243 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms