RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 USP25Q9UHP3 1055 aa13.03□□□□□ -0.32
APTX-213ENST00000465003 MYO9BQ13459 2157 aa13.03□□□□□ -0.32
APTX-213ENST00000465003 SPTBN5Q9NRC6 3674 aaKnown RBP13.02□□□□□ -0.32
APTX-213ENST00000465003 A0A1W2PPC1 479 aa13.02□□□□□ -0.32
APTX-213ENST00000465003 BIN1O00499 593 aa13.02□□□□□ -0.32
APTX-213ENST00000465003 HOXD13P35453 343 aa13.02□□□□□ -0.32
APTX-213ENST00000465003 FXR1P51114 621 aaKnown RBP eCLIP13.02□□□□□ -0.32
APTX-213ENST00000465003 MAP4K3Q8IVH8 894 aa13.02□□□□□ -0.32
APTX-213ENST00000465003 RC3H2Q9HBD1 1191 aaKnown RBP13.02□□□□□ -0.32
APTX-213ENST00000465003 TMEM161AQ9NX61 479 aa13.02□□□□□ -0.32
APTX-213ENST00000465003 PARP2Q9UGN5 583 aa13.02□□□□□ -0.32
APTX-213ENST00000465003 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.32
APTX-213ENST00000465003 ZMYM2Q9UBW7 1377 aa13.02□□□□□ -0.33
APTX-213ENST00000465003 TRIP11Q15643 1979 aa13.02□□□□□ -0.33
APTX-213ENST00000465003 KIAA1671Q9BY89 1806 aa13.02□□□□□ -0.33
APTX-213ENST00000465003 B4GALT3O60512 393 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 AXLP30530 894 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 TNFSF9P41273 254 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 FAM189BP81408 668 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 GLRA4Q5JXX5 417 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 PPP2R2DQ66LE6 453 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 CNNM4Q6P4Q7 775 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 PHOSPHO2Q8TCD6 241 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 SCFD1Q8WVM8 642 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 RABGGTAQ92696 567 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 TIFAQ96CG3 184 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 GAD1Q99259 594 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 RAD9AQ99638 391 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 ADPGKQ9BRR6 497 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 STRA6Q9BX79 667 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 GBP3Q9H0R5 595 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 PTPRHQ9HD43 1115 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 SEL1LQ9UBV2 794 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 PLAGL2Q9UPG8 496 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 TNFSF13BQ9Y275 285 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 TRANK1O15050 2925 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 LINC01553A4QN01 128 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 RFXAPO00287 272 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 N4BP3O15049 544 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 POMCP01189 267 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 STAG3L1P0CL83 205 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 HTRA4P83105 476 aaPredicted RBP13.01□□□□□ -0.33
APTX-213ENST00000465003 BTG3Q14201 252 aaPredicted RBP13.01□□□□□ -0.33
APTX-213ENST00000465003 MPZL3Q6UWV2 235 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 LRRC55Q6ZSA7 311 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 ZNF689Q96CS4 500 aaPredicted RBP13.01□□□□□ -0.33
APTX-213ENST00000465003 CASD1Q96PB1 797 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 C17orf80Q9BSJ5 609 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 TTYH1Q9H313 450 aaPredicted RBP13.01□□□□□ -0.33
APTX-213ENST00000465003 PCIF1Q9H4Z3 704 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 INSL6Q9Y581 213 aa13.01□□□□□ -0.33
APTX-213ENST00000465003 MRPL42Q9Y6G3 142 aaKnown RBP13.01□□□□□ -0.33
APTX-213ENST00000465003 PVALEFA0A1B0GWK0 134 aa13□□□□□ -0.33
APTX-213ENST00000465003 EPOPA6NHQ4 379 aa13□□□□□ -0.33
APTX-213ENST00000465003 CLDN3O15551 220 aa13□□□□□ -0.33
APTX-213ENST00000465003 MEFVO15553 781 aaPredicted RBP13□□□□□ -0.33
APTX-213ENST00000465003 TOM1L1O75674 476 aa13□□□□□ -0.33
APTX-213ENST00000465003 RECQL4O94761 1208 aa13□□□□□ -0.33
APTX-213ENST00000465003 ITGA4P13612 1032 aa13□□□□□ -0.33
APTX-213ENST00000465003 PROZP22891 400 aa13□□□□□ -0.33
APTX-213ENST00000465003 ADSSP30520 456 aa13□□□□□ -0.33
APTX-213ENST00000465003 SCNN1GP51170 649 aa13□□□□□ -0.33
APTX-213ENST00000465003 SMAD3P84022 425 aaKnown RBP13□□□□□ -0.33
APTX-213ENST00000465003 SPAG1Q07617 926 aa13□□□□□ -0.33
APTX-213ENST00000465003 NOLC1Q14978 699 aaKnown RBP eCLIP13□□□□□ -0.33
APTX-213ENST00000465003 PCBP1Q15365 356 aaKnown RBP eCLIP13□□□□□ -0.33
APTX-213ENST00000465003 L1TD1Q5T7N2 865 aaKnown RBP13□□□□□ -0.33
APTX-213ENST00000465003 ABI1Q8IZP0 508 aa13□□□□□ -0.33
APTX-213ENST00000465003 SAAL1Q96ER3 474 aa13□□□□□ -0.33
APTX-213ENST00000465003 FAM84AQ96KN4 292 aa13□□□□□ -0.33
APTX-213ENST00000465003 CBWD1Q9BRT8 395 aa13□□□□□ -0.33
APTX-213ENST00000465003 RSAD1Q9HA92 442 aa13□□□□□ -0.33
APTX-213ENST00000465003 SLC28A3Q9HAS3 691 aa13□□□□□ -0.33
APTX-213ENST00000465003 MIOSQ9NXC5 875 aa13□□□□□ -0.33
APTX-213ENST00000465003 MSRAQ9UJ68 235 aa13□□□□□ -0.33
APTX-213ENST00000465003 PCDHA11Q9Y5I1 949 aa13□□□□□ -0.33
APTX-213ENST00000465003 NLRC5Q86WI3 1866 aa13□□□□□ -0.33
APTX-213ENST00000465003 GOLGA8IPA6NC78 632 aa13□□□□□ -0.33
APTX-213ENST00000465003 GOLGA8JA6NMD2 632 aa13□□□□□ -0.33
APTX-213ENST00000465003 CLIC2O15247 247 aa13□□□□□ -0.33
APTX-213ENST00000465003 ACOT2P49753 483 aa13□□□□□ -0.33
APTX-213ENST00000465003 RAB27AP51159 221 aa13□□□□□ -0.33
APTX-213ENST00000465003 TAP1Q03518 808 aa13□□□□□ -0.33
APTX-213ENST00000465003 EPM2AIP1Q7L775 607 aaPredicted RBP13□□□□□ -0.33
APTX-213ENST00000465003 ARNTL2Q8WYA1 636 aa13□□□□□ -0.33
APTX-213ENST00000465003 EEF2KMTQ96G04 330 aa13□□□□□ -0.33
APTX-213ENST00000465003 ACCSQ96QU6 501 aa13□□□□□ -0.33
APTX-213ENST00000465003 TRAIPQ9BWF2 469 aa13□□□□□ -0.33
APTX-213ENST00000465003 ST6GALNAC4Q9H4F1 302 aa13□□□□□ -0.33
APTX-213ENST00000465003 TYW1Q9NV66 732 aaKnown RBP13□□□□□ -0.33
APTX-213ENST00000465003 ARL5CA6NH57 179 aa12.99□□□□□ -0.33
APTX-213ENST00000465003 NT5C1B-RDH14C9J2C7 533 aa12.99□□□□□ -0.33
APTX-213ENST00000465003 F8W810 466 aa12.99□□□□□ -0.33
APTX-213ENST00000465003 H0YCG3 227 aa12.99□□□□□ -0.33
APTX-213ENST00000465003 GOLGA6L22H0YM25 854 aa12.99□□□□□ -0.33
APTX-213ENST00000465003 ZNF623O75123 536 aa12.99□□□□□ -0.33
APTX-213ENST00000465003 OFD1O75665 1012 aa12.99□□□□□ -0.33
APTX-213ENST00000465003 LINC00271P0C7V0 271 aa12.99□□□□□ -0.33
APTX-213ENST00000465003 CXCL8P10145 99 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms