RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 NXPE3Q969Y0 559 aa23.1■■□□□ 1.29
CPSF7-209ENST00000463244 DYDC2Q96IM9 177 aa23.1■■□□□ 1.29
CPSF7-209ENST00000463244 CSRNP2Q9H175 543 aa23.1■■□□□ 1.29
CPSF7-209ENST00000463244 PLEKHA4Q9H4M7 779 aa23.1■■□□□ 1.29
CPSF7-209ENST00000463244 OTOGLQ3ZCN5 2332 aa23.09■■□□□ 1.29
CPSF7-209ENST00000463244 EPB41L2O43491 1005 aaKnown RBP23.09■■□□□ 1.29
CPSF7-209ENST00000463244 NR1I2O75469 434 aa23.09■■□□□ 1.29
CPSF7-209ENST00000463244 CYP4A11Q02928 519 aa23.09■■□□□ 1.29
CPSF7-209ENST00000463244 NCBP1Q09161 790 aaKnown RBP23.09■■□□□ 1.29
CPSF7-209ENST00000463244 CTTNQ14247 550 aaKnown RBP23.09■■□□□ 1.29
CPSF7-209ENST00000463244 PIK3AP1Q6ZUJ8 805 aa23.09■■□□□ 1.29
CPSF7-209ENST00000463244 GPR65Q8IYL9 337 aa23.09■■□□□ 1.29
CPSF7-209ENST00000463244 NAP1L4Q99733 375 aaKnown RBP23.09■■□□□ 1.29
CPSF7-209ENST00000463244 TM6SF1Q9BZW5 370 aa23.09■■□□□ 1.29
CPSF7-209ENST00000463244 GIT1Q9Y2X7 761 aa23.09■■□□□ 1.29
CPSF7-209ENST00000463244 INO80B-WBP1J3KQ70 363 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 MARCH6O60337 910 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 SPATA31D3P0C874 917 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 SRFP11831 508 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 MBTD1Q05BQ5 628 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 POU5F1BQ06416 359 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 AMHR2Q16671 573 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 SPATA31D4Q6ZUB0 917 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 ERMP1Q7Z2K6 904 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 GSTCDQ8NEC7 633 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 OXER1Q8TDS5 423 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 B3GALT6Q96L58 329 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 COLEC11Q9BWP8 271 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 GPR62Q9BZJ7 368 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 NT5C3AQ9H0P0 336 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 NXF3Q9H4D5 531 aaKnown RBP23.08■■□□□ 1.29
CPSF7-209ENST00000463244 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.08■■□□□ 1.29
CPSF7-209ENST00000463244 ZDHHC7Q9NXF8 308 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 CA14Q9ULX7 337 aa23.08■■□□□ 1.29
CPSF7-209ENST00000463244 CEP250Q9BV73 2442 aa23.08■■□□□ 1.28
CPSF7-209ENST00000463244 CACNA1IQ9P0X4 2223 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 STK25O00506 426 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 TGM5O43548 720 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 SLITRK3O94933 977 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 ARF4P18085 180 aaPredicted RBP23.07■■□□□ 1.28
CPSF7-209ENST00000463244 TFDP1Q14186 410 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 USP41Q3LFD5 358 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 FUT10Q6P4F1 479 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 PALB2Q86YC2 1186 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 TPH2Q8IWU9 490 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 SLFN12Q8IYM2 578 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 ASAP3Q8TDY4 903 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 APOL6Q9BWW8 343 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 TRIM6Q9C030 488 aaPredicted RBP23.07■■□□□ 1.28
CPSF7-209ENST00000463244 TBC1D17Q9HA65 648 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 GJB4Q9NTQ9 266 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.07■■□□□ 1.288e-9■■■■■ 27.8
CPSF7-209ENST00000463244 FNIP2Q9P278 1114 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 STK36Q9NRP7 1315 aa23.07■■□□□ 1.28
CPSF7-209ENST00000463244 CDKL5O76039 1030 aa23.06■■□□□ 1.28
CPSF7-209ENST00000463244 LAMP2P13473 410 aa23.06■■□□□ 1.28
CPSF7-209ENST00000463244 XBP1P17861 261 aa23.06■■□□□ 1.28
CPSF7-209ENST00000463244 ID4P47928 161 aa23.06■■□□□ 1.28
CPSF7-209ENST00000463244 SCRN1Q12765 414 aa23.06■■□□□ 1.28
CPSF7-209ENST00000463244 CAPSQ13938 189 aa23.06■■□□□ 1.28
CPSF7-209ENST00000463244 EARS2Q5JPH6 523 aaKnown RBP23.06■■□□□ 1.28
CPSF7-209ENST00000463244 LILRA6Q6PI73 481 aa23.06■■□□□ 1.28
CPSF7-209ENST00000463244 HACE1Q8IYU2 909 aa23.06■■□□□ 1.28
CPSF7-209ENST00000463244 NFKBIZQ9BYH8 718 aa23.06■■□□□ 1.28
CPSF7-209ENST00000463244 PRKD2Q9BZL6 878 aa23.06■■□□□ 1.28
CPSF7-209ENST00000463244 PIDD1Q9HB75 910 aa23.06■■□□□ 1.28
CPSF7-209ENST00000463244 ADAM28Q9UKQ2 775 aa23.06■■□□□ 1.28
CPSF7-209ENST00000463244 ZMYM2Q9UBW7 1377 aa23.05■■□□□ 1.28
CPSF7-209ENST00000463244 FANCMQ8IYD8 2048 aa23.05■■□□□ 1.28
CPSF7-209ENST00000463244 BAG4O95429 457 aaKnown RBP23.05■■□□□ 1.28
CPSF7-209ENST00000463244 RFX1P22670 979 aa23.05■■□□□ 1.28
CPSF7-209ENST00000463244 AKAP5P24588 427 aa23.05■■□□□ 1.28
CPSF7-209ENST00000463244 ARL2P36404 184 aa23.05■■□□□ 1.28
CPSF7-209ENST00000463244 POTEGQ6S5H5 508 aa23.05■■□□□ 1.28
CPSF7-209ENST00000463244 GET4Q7L5D6 327 aaPredicted RBP23.05■■□□□ 1.28
CPSF7-209ENST00000463244 GPR152Q8TDT2 470 aa23.05■■□□□ 1.28
CPSF7-209ENST00000463244 RIN2Q8WYP3 895 aaPredicted RBP23.05■■□□□ 1.28
CPSF7-209ENST00000463244 SEMA4AQ9H3S1 761 aa23.05■■□□□ 1.28
CPSF7-209ENST00000463244 ANHXE9PGG2 379 aa23.04■■□□□ 1.28
CPSF7-209ENST00000463244 DGAT1O75907 488 aa23.04■■□□□ 1.28
CPSF7-209ENST00000463244 LYPLA2O95372 231 aa23.04■■□□□ 1.28
CPSF7-209ENST00000463244 GRIK3Q13003 919 aa23.04■■□□□ 1.28
CPSF7-209ENST00000463244 HTR4Q13639 388 aa23.04■■□□□ 1.28
CPSF7-209ENST00000463244 PHLDB3Q6NSJ2 640 aa23.04■■□□□ 1.28
CPSF7-209ENST00000463244 GLYCTKQ8IVS8 523 aa23.04■■□□□ 1.28
CPSF7-209ENST00000463244 HSD17B14Q9BPX1 270 aa23.04■■□□□ 1.28
CPSF7-209ENST00000463244 EIF2AK1Q9BQI3 630 aaKnown RBP23.04■■□□□ 1.28
CPSF7-209ENST00000463244 PDRG1Q9NUG6 133 aa23.04■■□□□ 1.28
CPSF7-209ENST00000463244 FAM205CA6NFA0 338 aa23.03■■□□□ 1.28
CPSF7-209ENST00000463244 B4GALT5O43286 388 aa23.03■■□□□ 1.28
CPSF7-209ENST00000463244 LMNAP02545 664 aaKnown RBP23.03■■□□□ 1.28
CPSF7-209ENST00000463244 RPL17P18621 184 aaKnown RBP23.03■■□□□ 1.28
CPSF7-209ENST00000463244 GLRA2P23416 452 aa23.03■■□□□ 1.28
CPSF7-209ENST00000463244 CREMQ03060 361 aa23.03■■□□□ 1.28
CPSF7-209ENST00000463244 SLC27A1Q6PCB7 646 aa23.03■■□□□ 1.28
CPSF7-209ENST00000463244 CDR2LQ86X02 465 aaPredicted RBP23.03■■□□□ 1.28
CPSF7-209ENST00000463244 ARHGEF3Q9NR81 526 aa23.03■■□□□ 1.28
CPSF7-209ENST00000463244 SLC2A4RGQ9NR83 387 aa23.03■■□□□ 1.28
CPSF7-209ENST00000463244 ANKEF1Q9NU02 776 aa23.03■■□□□ 1.28
CPSF7-209ENST00000463244 MYH15Q9Y2K3 1946 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms