RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 SOD2P04179 222 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 AKAP5P24588 427 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 KLRC2P26717 231 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 GJB2P29033 226 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 PRPF4BQ13523 1007 aaKnown RBP8.04□□□□□ -1.12
PTPRF-210ENST00000463041 PTPN14Q15678 1187 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 ATAT1Q5SQI0 421 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 LARP1BQ659C4 914 aaKnown RBP8.04□□□□□ -1.12
PTPRF-210ENST00000463041 ARL6IP4Q66PJ3 421 aaKnown RBP8.04□□□□□ -1.12
PTPRF-210ENST00000463041 APBB1IPQ7Z5R6 666 aaPredicted RBP8.04□□□□□ -1.12
PTPRF-210ENST00000463041 GSTCDQ8NEC7 633 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 SNX29Q8TEQ0 813 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 BCL7CQ8WUZ0 217 aaPredicted RBP8.04□□□□□ -1.12
PTPRF-210ENST00000463041 AUTS2Q8WXX7 1259 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 RPGRIP1Q96KN7 1286 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 RIPOR3Q96MK2 946 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 TBC1D32Q96NH3 1257 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 KLHL5Q96PQ7 755 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 ADPGKQ9BRR6 497 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 TIPINQ9BVW5 301 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 APOL6Q9BWW8 343 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 VN1R3Q9BXE9 311 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 C17orf75Q9HAS0 396 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 PARP2Q9UGN5 583 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 DPP7Q9UHL4 492 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 SMC3Q9UQE7 1217 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 NR2E1Q9Y466 385 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 RBM19Q9Y4C8 960 aaKnown RBP8.04□□□□□ -1.12
PTPRF-210ENST00000463041 MUC6Q6W4X9 2439 aa8.04□□□□□ -1.12
PTPRF-210ENST00000463041 PHLPP2Q6ZVD8 1323 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 CITO14578 2027 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 ZDBF2Q9HCK1 2354 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 FAM86C2PA6NEL3 165 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 SLC26A4O43511 780 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 PRKCBP05771 671 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 THP07101 528 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 CNPP09543 421 aaKnown RBP8.03□□□□□ -1.12
PTPRF-210ENST00000463041 MLH1P40692 756 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 SCNN1GP51170 649 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 ATP2C1P98194 919 aaPredicted RBP8.03□□□□□ -1.12
PTPRF-210ENST00000463041 GRIK3Q13003 919 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 IL17AQ16552 155 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 TMEM132AQ24JP5 1023 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 HYIQ5T013 277 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 KIAA0319Q5VV43 1072 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 KIAA1841Q6NSI8 718 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 RINT1Q6NUQ1 792 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 CYP26C1Q6V0L0 522 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 C1orf186Q6ZWK4 172 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 TAS1R1Q7RTX1 841 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 BMP8AQ7Z5Y6 402 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 CABP7Q86V35 215 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 CDR2LQ86X02 465 aaPredicted RBP8.03□□□□□ -1.12
PTPRF-210ENST00000463041 RNF168Q8IYW5 571 aaPredicted RBP8.03□□□□□ -1.12
PTPRF-210ENST00000463041 HDAC7Q8WUI4 952 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 BSNDQ8WZ55 320 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 MFSD14AQ96MC6 490 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 FBXL18Q96ME1 805 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 ZFP42Q96MM3 310 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 RPS6KC1Q96S38 1066 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 NTPCRQ9BSD7 190 aaKnown RBP8.03□□□□□ -1.12
PTPRF-210ENST00000463041 MMTAG2Q9BU76 263 aaKnown RBP8.03□□□□□ -1.12
PTPRF-210ENST00000463041 HERC2P3Q9BVR0 1158 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 CCDC113Q9H0I3 377 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 NT5C3AQ9H0P0 336 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 NXF3Q9H4D5 531 aaKnown RBP8.03□□□□□ -1.12
PTPRF-210ENST00000463041 PDZD7Q9H5P4 517 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 TMEM134Q9H6X4 195 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 RXFP1Q9HBX9 757 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.03□□□□□ -1.12
PTPRF-210ENST00000463041 CHST7Q9NS84 486 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 KLK14Q9P0G3 267 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 MUTYHQ9UIF7 546 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 PRG3Q9Y2Y8 225 aaPredicted RBP8.03□□□□□ -1.12
PTPRF-210ENST00000463041 HCN4Q9Y3Q4 1203 aa8.03□□□□□ -1.12
PTPRF-210ENST00000463041 DOCK6Q96HP0 2047 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 TTLL13PA6NNM8 815 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 CCDC169A6NNP5 214 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 E9PMD0 336 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 TADA2AO75478 443 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 CD2BP2O95400 341 aaKnown RBP8.02□□□□□ -1.13
PTPRF-210ENST00000463041 BMP15O95972 392 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 SSBP05455 408 aaKnown RBP eCLIP8.02□□□□□ -1.13
PTPRF-210ENST00000463041 URODP06132 367 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 ADH1AP07327 375 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 EPCAMP16422 314 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 CDC25AP30304 524 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 GLUD2P49448 558 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 CLCN4P51793 760 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 PEX3P56589 373 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 ZXDAP98168 799 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 DSG1Q02413 1049 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 TUSC3Q13454 348 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 USP41Q3LFD5 358 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 DCAF4L1Q3SXM0 396 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 RARS2Q5T160 578 aaKnown RBP8.02□□□□□ -1.13
PTPRF-210ENST00000463041 NT5DC1Q5TFE4 455 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 ELMSAN1Q6PJG2 1045 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 PLCD3Q8N3E9 789 aa8.02□□□□□ -1.13
PTPRF-210ENST00000463041 C12orf76Q8N812 135 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms