RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CKAP2LQ8IYA6 745 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 ZNF713Q8N859 430 aaPredicted RBP8.7□□□□□ -1.02
SMC3-202ENST00000462899 FANCBQ8NB91 859 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 TMEM87AQ8NBN3 555 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 SMG7Q92540 1137 aaKnown RBP8.7□□□□□ -1.02
SMC3-202ENST00000462899 FGF14Q92915 247 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 CLDN23Q96B33 292 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 TMEM87BQ96K49 555 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 MBOAT7Q96N66 472 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 NT5C3AQ9H0P0 336 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 MRPL17Q9NRX2 175 aaKnown RBP8.7□□□□□ -1.02
SMC3-202ENST00000462899 CHST7Q9NS84 486 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 ZSCAN32Q9NX65 697 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 ZDHHC7Q9NXF8 308 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 BARHL2Q9NY43 387 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMC3-202ENST00000462899 NCDNQ9UBB6 729 aa8.7□□□□□ -1.02
SMC3-202ENST00000462899 CDV3Q9UKY7 258 aaKnown RBP8.7□□□□□ -1.02
SMC3-202ENST00000462899 FREM2Q5SZK8 3169 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 A0A087WZ62 844 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 ADH1AP07327 375 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 SKIP12755 728 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 RFX1P22670 979 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 CHMLP26374 656 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 CIITAP33076 1130 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 MAGEA9P43362 315 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 NAPAP54920 295 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 GPC5P78333 572 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 DSG1Q02413 1049 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 PRKCQQ04759 706 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 DSC1Q08554 894 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 MLF2Q15773 248 aaPredicted RBP8.69□□□□□ -1.02
SMC3-202ENST00000462899 LONRF3Q496Y0 759 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 UBXN11Q5T124 520 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 TWF2Q6IBS0 349 aaKnown RBP8.69□□□□□ -1.02
SMC3-202ENST00000462899 PARM1Q6UWI2 310 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 B3GNT9Q6UX72 402 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 RSPO2Q6UXX9 243 aaPredicted RBP8.69□□□□□ -1.02
SMC3-202ENST00000462899 GET4Q7L5D6 327 aaPredicted RBP8.69□□□□□ -1.02
SMC3-202ENST00000462899 ZNF410Q86VK4 478 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 RAB11FIP4Q86YS3 637 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 COLGALT2Q8IYK4 626 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 TMTC2Q8N394 836 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 CCDC82Q8N4S0 544 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 FDXACB1Q9BRP7 624 aaPredicted RBP8.69□□□□□ -1.02
SMC3-202ENST00000462899 ZNF577Q9BSK1 485 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 GCOM2Q9BZD3 368 aaPredicted RBP8.69□□□□□ -1.02
SMC3-202ENST00000462899 LTB4R2Q9NPC1 389 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 AGPAT5Q9NUQ2 364 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 PIN4Q9Y237 131 aaKnown RBP8.69□□□□□ -1.02
SMC3-202ENST00000462899 INPP5FQ9Y2H2 1132 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 ZFP37Q9Y6Q3 630 aaPredicted RBP8.69□□□□□ -1.02
SMC3-202ENST00000462899 EML5Q05BV3 1969 aa8.69□□□□□ -1.02
SMC3-202ENST00000462899 TRIP11Q15643 1979 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 SMCO2A6NFE2 343 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 CCDC69A6NI79 296 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 WDR64B1ANS9 1081 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 F8W810 466 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 SLC30A4O14863 429 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 LAMTOR5O43504 91 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 TGM5O43548 720 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 URODP06132 367 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 SFPQP23246 707 aaKnown RBP eCLIP8.68□□□□□ -1.02
SMC3-202ENST00000462899 HOXA11P31270 313 aaPredicted RBP8.68□□□□□ -1.02
SMC3-202ENST00000462899 MCM5P33992 734 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 RPS9P46781 194 aaKnown RBP8.68□□□□□ -1.02
SMC3-202ENST00000462899 GLUD2P49448 558 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 CDC42EP1Q00587 391 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 RNASELQ05823 741 aaKnown RBP8.68□□□□□ -1.02
SMC3-202ENST00000462899 TTC22Q5TAA0 569 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 CASC1Q6TDU7 716 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 TRMT1LQ7Z2T5 733 aaKnown RBP8.68□□□□□ -1.02
SMC3-202ENST00000462899 GPR65Q8IYL9 337 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 SHDQ96IW2 340 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 NIFKQ9BYG3 293 aaKnown RBP8.68□□□□□ -1.02
SMC3-202ENST00000462899 BCO2Q9BYV7 579 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 PRKD2Q9BZL6 878 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 GBP3Q9H0R5 595 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 GLT8D2Q9H1C3 349 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 PLEKHA4Q9H4M7 779 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 RSAD1Q9HA92 442 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 IFT122Q9HBG6 1241 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 FAM217BQ9NTX9 383 aaPredicted RBP8.68□□□□□ -1.02
SMC3-202ENST00000462899 SPATA6Q9NWH7 488 aaPredicted RBP8.68□□□□□ -1.02
SMC3-202ENST00000462899 FNIP2Q9P278 1114 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 DPP7Q9UHL4 492 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 SSX2IPQ9Y2D8 614 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 PCDHB2Q9Y5E7 798 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 RBM8AQ9Y5S9 174 aaKnown RBP8.68□□□□□ -1.02
SMC3-202ENST00000462899 CNTNAP2Q9UHC6 1331 aa8.68□□□□□ -1.02
SMC3-202ENST00000462899 SETXQ7Z333 2677 aaKnown RBP8.68□□□□□ -1.02
SMC3-202ENST00000462899 ESYT2A0FGR8 921 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 TMEM150BA6NC51 233 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 C2CD2LO14523 706 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 TBC1D4O60343 1298 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 NCLP19338 710 aaKnown RBP8.67□□□□□ -1.02
SMC3-202ENST00000462899 TARSP26639 723 aaKnown RBP8.67□□□□□ -1.02
SMC3-202ENST00000462899 CLCN1P35523 988 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 ZNF76P36508 570 aa8.67□□□□□ -1.02
SMC3-202ENST00000462899 AK2P54819 239 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms